RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
HMGN1-219ENST00000491183 HLA-DRB4X5D2U9 266 aa13.01□□□□□ -0.33
HMGN1-219ENST00000491183 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 OR8I2Q8N0Y5 310 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 OR4D5Q8NGN0 318 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 COQ8AQ8NI60 647 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 PPP1R14BQ96C90 147 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 C17orf77Q96MU5 243 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 LINC00052Q96N35 136 aa13□□□□□ -0.33
HMGN1-219ENST00000491183 PMS2P5A8MQ11 134 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 CFDP00746 253 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-219ENST00000491183 IL7P13232 177 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 ID1P41134 155 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 PSMB3P49720 205 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 PAX9P55771 341 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
HMGN1-219ENST00000491183 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
HMGN1-219ENST00000491183 C2CD4CQ8TF44 421 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 C1QTNF4Q9BXJ3 329 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-219ENST00000491183 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
HMGN1-219ENST00000491183 IGKV3-20P01619 116 aa12.98□□□□□ -0.33
HMGN1-219ENST00000491183 ACOT7LQ6ZUV0 252 aa12.98□□□□□ -0.33
HMGN1-219ENST00000491183 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
HMGN1-219ENST00000491183 SLC25A32Q9H2D1 315 aa12.98□□□□□ -0.33
HMGN1-219ENST00000491183 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 CENPXA8MT69 81 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 PLA2G10O15496 165 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 DEDDO75618 318 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 CCNKO75909 580 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 IFNA21P01568 189 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 ORM2P19652 201 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 FXYD7P58549 80 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 AKR1C1Q04828 323 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 C4orf46Q504U0 113 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 FOXI2Q6ZQN5 318 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 Q6ZTC4 211 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 TMEM144Q7Z5S9 345 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 APLNQ9ULZ1 77 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 SLC45A2Q9UMX9 530 aa12.97□□□□□ -0.33
HMGN1-219ENST00000491183 C11orf94C9JXX5 98 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 F6UB75 175 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 ISLRO14498 428 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 SSSCA1O60232 199 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 ZNF705AQ6ZN79 300 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-219ENST00000491183 BPIFCQ8NFQ6 507 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 C20orf173Q96LM9 149 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 CLUHP3Q96NS8 147 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 RSG1Q9BU20 258 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 SLC25A22Q9H936 323 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 CELA1Q9UNI1 258 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
HMGN1-219ENST00000491183 IGLL5B9A064 214 aa12.95□□□□□ -0.34
HMGN1-219ENST00000491183 CYP2G1PQ6ZSU1 146 aa12.95□□□□□ -0.34
HMGN1-219ENST00000491183 ZNF709Q8N972 641 aa12.95□□□□□ -0.34
HMGN1-219ENST00000491183 OR4B1Q8NGF8 309 aa12.95□□□□□ -0.34
HMGN1-219ENST00000491183 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
HMGN1-219ENST00000491183 ZNF705FA8MVS1 300 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-219ENST00000491183 ZNF705DP0CH99 300 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-219ENST00000491183 ZNF705BP0CI00 300 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-219ENST00000491183 GALR1P47211 349 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 TCTAP57738 103 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 PRR20EP86478 221 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 PRR20CP86479 221 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 PRR20DP86480 221 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 PRR20BP86481 221 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 PRR20AP86496 221 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 IAH1Q2TAA2 248 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-219ENST00000491183 C12orf74Q32Q52 190 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 TMEM14EPQ6UXP3 125 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 ZNF767PQ75MW2 155 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-219ENST00000491183 OR1B1Q8NGR6 318 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 C16orf92Q96LL3 132 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 TMEM147Q9BVK8 224 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 SLC35B3Q9H1N7 401 aa12.94□□□□□ -0.34
HMGN1-219ENST00000491183 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 A0A0J9YX75 114 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 SMCO3A2RU48 225 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 IL5P05113 134 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 METTL15P1P0C7V9 234 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 MEOX2P50222 304 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 RRAS2P62070 204 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-219ENST00000491183 CNPY1Q3B7I2 92 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 FAM78BQ5VT40 261 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 SPATA31B1PQ5VZV4 182 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 NEU1Q99519 415 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 SCRT1Q9BWW7 348 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 DOK5Q9P104 306 aa12.93□□□□□ -0.34
HMGN1-219ENST00000491183 H3BRN7 92 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 SCGB1D2O95969 90 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 DLK1P80370 383 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 PSG9Q00887 426 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 EBLN2Q6P2I7 272 aa12.92□□□□□ -0.34
HMGN1-219ENST00000491183 SLC25A39Q9BZJ4 359 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-219ENST00000491183 C20orf85Q9H1P6 137 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms