RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 UNC79Q9P2D8 2635 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 IGKV1D-37A0A075B6S9 117 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 A0A1B0GUS0 222 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 C2orf70A6NJV1 201 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 C17orf100A8MU93 164 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 HIGD1CA8MV81 97 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 ZNHIT1O43257 154 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 ACTL6BO94805 426 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 IGLV2-23P01705 113 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 LIPFP07098 398 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 CRYGBP07316 175 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 GP9P14770 177 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 CD40P25942 277 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 S100A7P31151 101 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 CASP6P55212 293 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 DLX6P56179 175 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 RPS16P62249 146 aaKnown RBP4.66□□□□□ -1.66
VPS41-214ENST00000490924 WT1-ASQ06250 92 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 RBPJQ06330 500 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 SLAQ13239 276 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 TMEM155Q4W5P6 130 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 LRRC10Q5BKY1 277 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 PATE2Q6UY27 113 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 C12orf54Q6X4T0 127 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 Q6ZN92 141 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 RBMXL3Q8N7X1 1067 aaKnown RBP4.66□□□□□ -1.66
VPS41-214ENST00000490924 ZNF738Q8NE65 137 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 TXN2Q99757 166 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 CLEC7AQ9BXN2 247 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 MRPL20Q9BYC9 149 aaKnown RBP4.66□□□□□ -1.66
VPS41-214ENST00000490924 HSPB8Q9UJY1 196 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 ASH1LQ9NR48 2969 aaKnown RBP4.66□□□□□ -1.66
VPS41-214ENST00000490924 DOCK7Q96N67 2140 aa4.66□□□□□ -1.66
VPS41-214ENST00000490924 PPIAL4EA0A075B759 164 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 IGLC7A0M8Q6 106 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 PPIAL4DF5H284 164 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 TMEM178BH3BS89 294 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 M0R1B8 84 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 M0R2Z0 102 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 SPRY3O43610 288 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 P01737 135 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 TCRAP04437 139 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 NBEAP1P0C6P0 100 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 PPIAL4FP0DN26 164 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 MGST1P10620 155 aaKnown RBP4.65□□□□□ -1.67
VPS41-214ENST00000490924 CHRNB4P30926 498 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 CCL11P51671 97 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 UBE2V1Q13404 147 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 LTC4SQ16873 150 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 TDRG1Q3Y452 100 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 MRPL54Q6P161 138 aaKnown RBP4.65□□□□□ -1.67
VPS41-214ENST00000490924 LINC00305Q7Z4B0 112 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 TMEM75Q8N9X5 138 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 OR4F17Q8NGA8 305 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 FAM57AQ8TBR7 257 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 IGFBPL1Q8WX77 278 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 RCHY1Q96PM5 261 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 HINT2Q9BX68 163 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 TMEM191AQ9H0A3 160 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 FNDC4Q9H6D8 234 aaPredicted RBP4.65□□□□□ -1.67
VPS41-214ENST00000490924 NGBQ9NPG2 151 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 JKAMPQ9P055 326 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 ZNF835Q9Y2P0 537 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 PPIAL4AQ9Y536 164 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 FAM215AQ9Y5M1 114 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 TNFRSF18Q9Y5U5 241 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 COX11Q9Y6N1 276 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 MED13Q9UHV7 2174 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 HCFC1P51610 2035 aa4.65□□□□□ -1.67
VPS41-214ENST00000490924 SMG1Q96Q15 3661 aaKnown RBP4.65□□□□□ -1.67
VPS41-214ENST00000490924 GPR179Q6PRD1 2367 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 FASNP49327 2511 aaKnown RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 IGHV3OR15-7A0A075B7D8 119 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 LOC102724200A0A096LPH7 203 aaPredicted RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 IGHV2-70DA0A0C4DH43 119 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 IGHV3-64DA0A0J9YX35 117 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 CGB1A6NKQ9 187 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 FAM90A27PA6NNH2 459 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 F2Z2F3 143 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 SYS1-DBNDD2H3BUS1 97 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 K7EQM0 130 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 NDUFB3O43676 98 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 HNF1AP20823 631 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 RPL27AP46776 148 aaKnown RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 RHOGP84095 191 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 SRSF2Q01130 221 aaKnown RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 FXYD3Q14802 87 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 TNXAQ16473 311 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 TMEM200BQ69YZ2 307 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 ZNF493Q6ZR52 646 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 FAM216BQ8N7L0 139 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 PIFOQ8TCI5 191 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 CFHR4Q92496 578 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 NPIPB3Q92617 1050 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 DAZAP1Q96EP5 407 aaKnown RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 CCL13Q99616 98 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 SCNM1Q9BWG6 230 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 RAB1BQ9H0U4 201 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 SERTAD4Q9NUC0 356 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 FZR1Q9UM11 496 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms