RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 Q6ZN92 141 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 GGTLC1Q9BX51 225 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 C19orf84I3L1E1 186 aa11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 HOXA3O43365 443 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 NDPQ00604 133 aa11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 RNF224P0DH78 156 aa11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 PMS2P5A8MQ11 134 aa11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 ZNF134P52741 427 aa11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 MUC21Q5SSG8 566 aa11.61□□□□□ -0.55
ARHGEF39-205ENST00000490638 TRGV2A0A075B6R0 118 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 RNASE4P34096 147 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 SCO2A0A1W2PP80 73 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 M0R2Z0 102 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 FGF23Q9GZV9 251 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-205ENST00000490638 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 NEU1Q99519 415 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 ACANP16112 2415 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 GRIFINA4D1Z8 144 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 ASIPP42127 132 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 MSMPQ1L6U9 139 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 LIME1Q9H400 295 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 OTORQ9NRC9 128 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 TRAV5A0A0B4J249 113 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 FAM223BA6NKX1 122 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 SMAGPQ0VAQ4 97 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 BIVMQ86UB2 503 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 FAM223AQ8IWN6 122 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 CHD3Q12873 2000 aaKnown RBP11.59□□□□□ -0.55
ARHGEF39-205ENST00000490638 LHBP01229 141 aa11.58□□□□□ -0.55
ARHGEF39-205ENST00000490638 Q8NFD4 153 aa11.58□□□□□ -0.55
ARHGEF39-205ENST00000490638 TRGV9Q99603 122 aa11.58□□□□□ -0.55
ARHGEF39-205ENST00000490638 RHPN1-AS1Q9BWJ2 59 aa11.58□□□□□ -0.55
ARHGEF39-205ENST00000490638 MUC21A0A0G2JKD1 596 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 MUC21A0A140T8X8 626 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 PRB4P10163 310 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 MT-ND6P03923 174 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 SRSF8Q9BRL6 282 aaKnown RBP11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 TNRC6AQ8NDV7 1962 aaKnown RBP11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 PHOX2AO14813 284 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 GNG5P63218 68 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 TOMM20LQ6UXN7 152 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 ZNF841Q6ZN19 808 aa11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 MUC22E2RYF6 1773 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF39-205ENST00000490638 C15orf62A8K5M9 175 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 CD5P06127 495 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 A0A1W2PRE2 83 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 FABP5P3A8MUU1 101 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 CMC4P56277 68 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 PUSL1Q8N0Z8 303 aaKnown RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 SLC25A39Q9BZJ4 359 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 FGF16O43320 207 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 G0S2P27469 103 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 KLHDC1Q8N7A1 406 aa11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 FAM110DQ8TAY7 271 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 ZNF106Q9H2Y7 1883 aaKnown RBP11.57□□□□□ -0.56
ARHGEF39-205ENST00000490638 UBE2L6O14933 153 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 NDUFB8O95169 186 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 CD7P09564 240 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 BTF3P20290 206 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 C22orf34Q6ZV56 151 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 ATG101Q9BSB4 218 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 EPDR1Q9UM22 224 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 FBLN7Q53RD9 439 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 EIF4E3Q8N5X7 224 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 IGHV4-38-2P0DP08 117 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 TAS2R60P59551 318 aa11.56□□□□□ -0.56
ARHGEF39-205ENST00000490638 FBLL1A6NHQ2 334 aaKnown RBP11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 VPREB3Q9UKI3 123 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 GUSBP1Q15486 140 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 ASCL2Q99929 193 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 KIAA1644Q3SXP7 199 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 OR1N2Q8NGR9 330 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
ARHGEF39-205ENST00000490638 OR11H12B2RN74 326 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 SDF2L1Q9HCN8 221 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 OVOL1O14753 267 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 PAX1P15863 534 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
ARHGEF39-205ENST00000490638 HIST2H2BCQ6DN03 193 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms