RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 ABCA13Q86UQ4 5058 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 FSIP2Q5CZC0 6907 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 ZGRF1Q86YA3 2104 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 A0A1W2PPM0 123 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 TCRBV4S1A1TA0A5B7 111 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 TIMM17BO60830 172 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 SERPINB9P50453 376 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 SRSF6Q13247 344 aaKnown RBP0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 EDDM3AQ14507 147 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 SPA17Q15506 151 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 TMEM254Q8TBM7 123 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 TMEM133Q9H2Q1 129 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 PTPRFP10586 1907 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 CCDC144AA2RUR9 1427 aa0.46□□□□□ -2.34
PRPF4B-207ENST00000490399 MUC4Q99102 2169 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 TLCD2A6NGC4 264 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 DHFRP00374 187 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 EIF5AP63241 154 aaKnown RBP0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 GLTPQ9NZD2 209 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 RYR3Q15413 4870 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 SSPOA2VEC9 5147 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 DOCK4Q8N1I0 1966 aa0.45□□□□□ -2.34
PRPF4B-207ENST00000490399 HERC1Q15751 4861 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 KNTC1P50748 2209 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 SIP14410 1827 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 OR2T8A6NH00 312 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 J3QRK9 145 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 CD2P06729 351 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 NEFHP12036 1026 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 AP3S2P59780 193 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 IFT20Q8IY31 132 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 ITFG2Q969R8 447 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 PPP1R14BQ96C90 147 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 BTF3L4Q96K17 158 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 PHRF1Q9P1Y6 1649 aaKnown RBP0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 MAST4O15021 2626 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 EPPK1P58107 5090 aaKnown RBP0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 RTL1A6NKG5 1358 aa0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 MYO5AQ9Y4I1 1855 aaKnown RBP0.44□□□□□ -2.34
PRPF4B-207ENST00000490399 IGHV1-58A0A0C4DH39 117 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 PFDN1O60925 122 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 E2F6O75461 281 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 SRP14P37108 136 aaKnown RBP0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 HIST1H3AP68431 136 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 H3F3AP84243 136 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 TMED2Q15363 201 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 AKIRIN2Q53H80 203 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 CROCCP2Q86T23 111 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 GPER1Q99527 375 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 PARVGQ9HBI0 331 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 NCOA1Q15788 1441 aa0.43□□□□□ -2.34
PRPF4B-207ENST00000490399 SERPINA1P01009 418 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 MYL6P60660 151 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 TMEM97Q5BJF2 176 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 LYRM7Q5U5X0 104 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 PDZD9Q8IXQ8 264 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 CHMP6Q96FZ7 201 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 C10orf95Q9H7T3 257 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 RNF122Q9H9V4 155 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 ORMDL1Q9P0S3 153 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 VWFP04275 2813 aa0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 TEP1Q99973 2627 aaKnown RBP0.42□□□□□ -2.34
PRPF4B-207ENST00000490399 PLB1Q6P1J6 1458 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 HYDINQ4G0P3 5121 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 B4DSR2 109 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 NUPR1O60356 82 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 PIGPP57054 158 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 MRPS25P82663 173 aaKnown RBP0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 MYL5Q02045 173 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 KRR1Q13601 381 aaKnown RBP0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 RGS21Q2M5E4 152 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 LIN52Q52LA3 116 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 BCL2L15Q5TBC7 163 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 PLPP5Q8NEB5 264 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 ZNF431Q8TF32 576 aaPredicted RBP0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 LINC00052Q96N35 136 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 LINC00467Q9BRT7 94 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 KIFC1Q9BW19 673 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 TMEM126AQ9H061 195 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 PSTPIP2Q9H939 334 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 NMNAT1Q9HAN9 279 aaPredicted RBP0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 ARL2BPQ9Y2Y0 163 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 NCAPD3P42695 1498 aa0.41□□□□□ -2.34
PRPF4B-207ENST00000490399 KDM6AO15550 1401 aaPredicted RBP0.4□□□□□ -2.34
PRPF4B-207ENST00000490399 ARHGEF11O15085 1522 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 TMEM114B3SHH9 223 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 AIPO00170 330 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 NDUFB3O43676 98 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 GGCTO75223 188 aaKnown RBP0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 HAND1O96004 215 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 APOA2P02652 100 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 S100A6P06703 90 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 ERP29P30040 261 aaKnown RBP0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 HOXA6P31267 233 aa0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 MRPS15P82914 257 aaKnown RBP0.4□□□□□ -2.35
PRPF4B-207ENST00000490399 REEP5Q00765 189 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms