RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 HRH4Q9H3N8 390 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 KCNIP3Q9Y2W7 256 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 HLA-DRB4X5D2U9 266 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 PCLOQ9Y6V0 5065 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 RYR1P21817 5038 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 ZNF705FA8MVS1 300 aaPredicted RBP8.5□□□□□ -1.05
SRSF4-204ENST00000489898 DNASE2O00115 360 aaPredicted RBP8.5□□□□□ -1.05
SRSF4-204ENST00000489898 IFNA10P01566 189 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 ZNF705DP0CH99 300 aaPredicted RBP8.5□□□□□ -1.05
SRSF4-204ENST00000489898 ZNF705BP0CI00 300 aaPredicted RBP8.5□□□□□ -1.05
SRSF4-204ENST00000489898 RD3LP0DJH9 198 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 EIF2B2P49770 351 aaKnown RBP8.5□□□□□ -1.05
SRSF4-204ENST00000489898 DHRS2Q13268 280 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 STHQ8IWL8 128 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 Q8WTZ3 238 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 SCGB3A2Q96PL1 93 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 TRGV9Q99603 122 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 MAGT1Q9H0U3 335 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
SRSF4-204ENST00000489898 RCL1Q9Y2P8 373 aaKnown RBP8.5□□□□□ -1.05
SRSF4-204ENST00000489898 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
SRSF4-204ENST00000489898 C9orf170A2RU37 121 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 H3BP45 60 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 VAMP1P23763 118 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 BCAP31P51572 246 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
SRSF4-204ENST00000489898 UBE2MP61081 183 aaKnown RBP8.49□□□□□ -1.05
SRSF4-204ENST00000489898 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 ETFRF1Q6IPR1 90 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
SRSF4-204ENST00000489898 AMTNQ6UX39 209 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 Q6ZTC4 211 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 ACOT7LQ6ZUV0 252 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 PPP1R14BQ96C90 147 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 SLC25A32Q9H2D1 315 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 TMED3Q9Y3Q3 217 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 HSPG2P98160 4391 aa8.49□□□□□ -1.05
SRSF4-204ENST00000489898 PLA2G10O15496 165 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 SYNGR2O43760 224 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 LY6G6CO95867 125 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 HOXB5P09067 269 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 ANXA3P12429 323 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
SRSF4-204ENST00000489898 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
SRSF4-204ENST00000489898 ID3Q02535 119 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 C11orf45Q8TAV5 145 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
SRSF4-204ENST00000489898 SAV1Q9H4B6 383 aaPredicted RBP8.48□□□□□ -1.05
SRSF4-204ENST00000489898 TRAV8-2A0A0B4J237 113 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 F6UB75 175 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 INMT-MINDY4F8WBC2 141 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 MRPS12O15235 138 aaKnown RBP8.47□□□□□ -1.05
SRSF4-204ENST00000489898 MIFP14174 115 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 ANXA7P20073 488 aaKnown RBP8.47□□□□□ -1.05
SRSF4-204ENST00000489898 NKX2-1P43699 371 aaPredicted RBP8.47□□□□□ -1.05
SRSF4-204ENST00000489898 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
SRSF4-204ENST00000489898 OR2F1Q13607 317 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 TMEM41BQ5BJD5 291 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 TMEM14EPQ6UXP3 125 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 SLC35E1Q96K37 410 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 NUDT15Q9NV35 164 aa8.47□□□□□ -1.05
SRSF4-204ENST00000489898 ZFP92A6NM28 416 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 H3BRN7 92 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 SCGB2A1O75556 95 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 IFNA4P05014 189 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 OR4E1P0C645 316 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 PSMB3P49720 205 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 LYZP61626 148 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 ARL16Q0P5N6 197 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 C1orf194Q5T5A4 169 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 AKAP14Q86UN6 197 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 NOXA1Q86UR1 476 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 PBDC1Q9BVG4 233 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 SLC35B3Q9H1N7 401 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 FBXL17Q9UF56 701 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 ABCA13Q86UQ4 5058 aa8.46□□□□□ -1.06
SRSF4-204ENST00000489898 A0A0J9YX75 114 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 K7EPK0 472 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 WRBO00258 174 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 PRAF2O60831 178 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 AMBPP02760 352 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 TCRBP04435 133 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 H2AFB2P0C5Z0 115 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 AP2S1P53680 142 aaPredicted RBP8.45□□□□□ -1.06
SRSF4-204ENST00000489898 FOXI2Q6ZQN5 318 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 C1orf158Q8N1D5 194 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 NEU1Q99519 415 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 C20orf85Q9H1P6 137 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 GPN1Q9HCN4 374 aaPredicted RBP8.45□□□□□ -1.06
SRSF4-204ENST00000489898 XCL2Q9UBD3 114 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 SLC45A2Q9UMX9 530 aa8.45□□□□□ -1.06
SRSF4-204ENST00000489898 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
SRSF4-204ENST00000489898 TRAV6A0A075B6T7 132 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms