RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SLC38A11Q08AI6 406 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 PLCXD2Q0VAA5 305 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 HES1Q14469 280 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 OR8B8Q15620 311 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 NNATQ16517 81 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 DHFR2Q86XF0 187 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 PRR15Q8IV56 129 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 SLC30A7Q8NEW0 376 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 OR2T10Q8NGZ9 312 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 BORCS5Q969J3 196 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 ISOC1Q96CN7 298 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 SLC25A21Q9BQT8 299 aaPredicted RBP2.14□□□□□ -2.07
VPS26A-206ENST00000489794 ADAT1Q9BUB4 502 aaKnown RBP2.14□□□□□ -2.07
VPS26A-206ENST00000489794 NPCDR1Q9BY65 106 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 YIPF3Q9GZM5 350 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 POPDC3Q9HBV1 291 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 SPANXA1Q9NS26 97 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 JPT1Q9UK76 154 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 RPL26L1Q9UNX3 145 aaKnown RBP2.14□□□□□ -2.07
VPS26A-206ENST00000489794 COL11A1P12107 1806 aaPredicted RBP2.14□□□□□ -2.07
VPS26A-206ENST00000489794 EML6Q6ZMW3 1958 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 PLXNA3P51805 1871 aa2.14□□□□□ -2.07
VPS26A-206ENST00000489794 N4BP2Q86UW6 1770 aaPredicted RBP2.13□□□□□ -2.07
VPS26A-206ENST00000489794 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 SCN8AQ9UQD0 1980 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 ARRDC5A6NEK1 342 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 HMGN1P05114 100 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 P0DMU3 169 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 FAM231AP0DMU4 169 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 FAM231CP0DMU5 169 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 BRMS1LQ5PSV4 323 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 Q6ZQT0 140 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 OR4D11Q8NGI4 311 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 RNF11Q9Y3C5 154 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 CEP152O94986 1710 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 ARHGEF28Q8N1W1 1705 aaKnown RBP2.13□□□□□ -2.07
VPS26A-206ENST00000489794 NUP210Q8TEM1 1887 aaPredicted RBP2.13□□□□□ -2.07
VPS26A-206ENST00000489794 ARAP1Q96P48 1450 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 MPDZO75970 2070 aa2.13□□□□□ -2.07
VPS26A-206ENST00000489794 TRAV3A0A0B4J244 114 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 A0A0G2JQZ4 141 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 DEGS1O15121 323 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 NAPSAO96009 420 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 PMP2P02689 132 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 CTSDP07339 412 aaPredicted RBP2.12□□□□□ -2.07
VPS26A-206ENST00000489794 GTF2A1P52655 376 aaPredicted RBP2.12□□□□□ -2.07
VPS26A-206ENST00000489794 EIF5AL1Q6IS14 154 aaKnown RBP2.12□□□□□ -2.07
VPS26A-206ENST00000489794 DEFB128Q7Z7B8 93 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 OR8B3Q8NGG8 313 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 BCL2L10Q9HD36 194 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 TMEM138Q9NPI0 162 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 NAT8BQ9UHF3 227 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 NCAPD3P42695 1498 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 XIRP1Q702N8 1843 aaKnown RBP2.12□□□□□ -2.07
VPS26A-206ENST00000489794 ADAMTS7Q9UKP4 1686 aa2.12□□□□□ -2.07
VPS26A-206ENST00000489794 NUMA1Q14980 2115 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 BCL9O00512 1426 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 TRAV36DV7A0A075B6V5 113 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 A0A087WX48 190 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 SDCBPO00560 298 aaPredicted RBP2.11□□□□□ -2.07
VPS26A-206ENST00000489794 TIMM17BO60830 172 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 CST7O76096 145 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 GADD45GO95257 159 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 HLA-EP13747 358 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 MYL5Q02045 173 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 EIF3IQ13347 325 aaKnown RBP2.11□□□□□ -2.07
VPS26A-206ENST00000489794 ZNF345Q14585 488 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 KRTAP21-3Q3LHN1 58 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 CCDC153Q494R4 210 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 Q6ZTI0 123 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 C3orf56Q8N813 242 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 ZNF714Q96N38 554 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 TIMM21Q9BVV7 248 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 OR2H1Q9GZK4 316 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 CACYBPQ9HB71 228 aaKnown RBP2.11□□□□□ -2.07
VPS26A-206ENST00000489794 RASL12Q9NYN1 266 aa2.11□□□□□ -2.07
VPS26A-206ENST00000489794 MUC6Q6W4X9 2439 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 NUP98P52948 1817 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 IGLV3-9A0A075B6K5 115 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 TRAV1-1A0A0B4J248 108 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 HIST1H2BKO60814 126 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 LYZL6O75951 148 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 HIST1H2BJP06899 126 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 FABP2P12104 132 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 HBBP68871 147 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 TMEM155Q4W5P6 130 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 PCOTHQ58A44 107 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 TMEM229BQ8NBD8 167 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 TXNDC17Q9BRA2 123 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 HS3ST2Q9Y278 367 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
VPS26A-206ENST00000489794 ANKRD31Q8N7Z5 1873 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 MYH10P35580 1976 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 CCDC88CQ9P219 2028 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 A0A1B0GX51 115 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 ZNF705FA8MVS1 300 aaPredicted RBP2.09□□□□□ -2.07
VPS26A-206ENST00000489794 IBA57-AS1B1ANH7 110 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 MGST1P10620 155 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms