RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TSPOP30536 169 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 PAX9P55771 341 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 GNG2P59768 71 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 ARL6IP1Q15041 203 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 SPHARQ15513 63 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 TSC22D3Q99576 134 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 CBY1Q9Y3M2 126 aa6.22□□□□□ -1.41
SSBP1-212ENST00000489378 A0A0J9YX75 114 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 IFITM5A6NNB3 132 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 ZNF701M0R085 212 aaPredicted RBP6.21□□□□□ -1.42
SSBP1-212ENST00000489378 SOCS3O14543 225 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 SIVA1O15304 175 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 CRXO43186 299 aaPredicted RBP6.21□□□□□ -1.42
SSBP1-212ENST00000489378 SCGB2A1O75556 95 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 FCER2P06734 321 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 GNAO1P09471 354 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 RANBP1P43487 201 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
SSBP1-212ENST00000489378 HSPE1P61604 102 aaKnown RBP6.21□□□□□ -1.42
SSBP1-212ENST00000489378 DHODHQ02127 395 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 AMTNQ6UX39 209 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 BEST4Q8NFU0 473 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 TSPAN14Q8NG11 270 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 OR4A16Q8NH70 328 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 COQ8AQ8NI60 647 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 CYGBQ8WWM9 190 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 UFD1Q92890 307 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 MND1Q9BWT6 205 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 FAM212BQ9NTI7 297 aaPredicted RBP6.21□□□□□ -1.42
SSBP1-212ENST00000489378 FKBP14Q9NWM8 211 aa6.21□□□□□ -1.42
SSBP1-212ENST00000489378 LOC100506127A0A0U1RQW1 187 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 F8WDY8 70 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 M0R2Z0 102 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 RNASE2P10153 161 aaKnown RBP6.2□□□□□ -1.42
SSBP1-212ENST00000489378 ELK1P19419 428 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 SNCAP37840 140 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 OPRK1P41145 380 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 HTR2BP41595 481 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 PSMB3P49720 205 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 ATP5IP56385 69 aaPredicted RBP6.2□□□□□ -1.42
SSBP1-212ENST00000489378 FABP5Q01469 135 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 SPATA31B1PQ5VZV4 182 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 EBLN2Q6P2I7 272 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 IZUMO2Q6UXV1 221 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 SLC24A4Q8NFF2 622 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 Q8WTZ3 238 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 GPR146Q96CH1 333 aa6.2□□□□□ -1.42
SSBP1-212ENST00000489378 A8MTW9 85 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 INSP01308 110 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 IL4P05112 153 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 IGLC1P0CG04 106 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 ID1P41134 155 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 SPINK13Q1W4C9 94 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 IZUMO4Q1ZYL8 232 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 BAP18Q8IXM2 172 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 SEC22AQ96IW7 307 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 NOP10Q9NPE3 64 aaKnown RBP6.19□□□□□ -1.42
SSBP1-212ENST00000489378 PLCXD1Q9NUJ7 323 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 KLK11Q9UBX7 282 aa6.19□□□□□ -1.42
SSBP1-212ENST00000489378 TRAV30A0A087WSZ9 112 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 CORTO00230 105 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 WRBO00258 174 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 NXPH4O95158 308 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 IGKV1-39P01597 117 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 IGKV1D-39P04432 117 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 ASIPP42127 132 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 HERV-K104P61576 105 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 H2BFWTQ7Z2G1 175 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 HOGA1Q86XE5 327 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 PACRGLQ8N7B6 248 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 OR1S2Q8NGQ3 325 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 NUDT15Q9NV35 164 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 DOK5Q9P104 306 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 DAPK2Q9UIK4 370 aa6.18□□□□□ -1.42
SSBP1-212ENST00000489378 TIMM8BQ9Y5J9 83 aaPredicted RBP6.18□□□□□ -1.42
SSBP1-212ENST00000489378 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 A0A096LPF7 62 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 H3BNG1 76 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 PDCD5O14737 125 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 GSTZ1O43708 216 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-212ENST00000489378 HSMCR30P0CW71 290 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 OR10J1P30954 320 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 RPL5P46777 297 aaKnown RBP6.17□□□□□ -1.42
SSBP1-212ENST00000489378 RND2P52198 227 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 YPEL3P61236 119 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-212ENST00000489378 TRAM1Q15629 374 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 OR11H7Q8NGC8 314 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 OR6F1Q8NGZ6 308 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 MRGPRFQ96AM1 343 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 CCDC90BQ9GZT6 254 aa6.17□□□□□ -1.42
SSBP1-212ENST00000489378 A0A087WWL8 130 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 INS-IGF2F8WCM5 200 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 HTN1P15515 57 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 PSMA1P25786 263 aaKnown RBP6.16□□□□□ -1.42
SSBP1-212ENST00000489378 B2MP61769 119 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 PRSS54Q6PEW0 395 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 LINC00612Q8N6U2 182 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 SLC35G3Q8N808 338 aa6.16□□□□□ -1.42
SSBP1-212ENST00000489378 OR51G1Q8NGK1 321 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms