RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZNF117Q03924 483 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 BIKQ13323 160 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 KPRPQ5T749 579 aaPredicted RBP2.06□□□□□ -2.08
PRPF4-203ENST00000488937 SPINK14Q6IE38 97 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 ZNF705AQ6ZN79 300 aaPredicted RBP2.06□□□□□ -2.08
PRPF4-203ENST00000488937 C3orf62Q6ZUJ4 267 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 EPDR1Q9UM22 224 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 BAIAP2Q9UQB8 552 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 ADAMTS9Q9P2N4 1935 aa2.06□□□□□ -2.08
PRPF4-203ENST00000488937 IBTKQ9P2D0 1353 aaPredicted RBP2.06□□□□□ -2.08
PRPF4-203ENST00000488937 MYH1P12882 1939 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 A0A1W2PQD3 144 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 H3BMG7 143 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 WISP3O95389 354 aaPredicted RBP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 NAPSAO96009 420 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 PAEPP09466 180 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 SMIM6P0DI80 62 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 ZNF728P0DKX0 622 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 GZMBP10144 247 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 FUSP35637 526 aaKnown RBP eCLIP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 RPL35P42766 123 aaKnown RBP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 AQP4P55087 323 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 NDUFA6P56556 154 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 QRFPP83859 136 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 RHOGP84095 191 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 NEDD8Q15843 81 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 ZNF181Q2M3W8 571 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 PATE2Q6UY27 113 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 C4orf22Q6V702 233 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 BPIFA4PQ86YQ2 179 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 PDZD9Q8IXQ8 264 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 SIGLECL1Q8N7X8 197 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 SCGB3A1Q96QR1 104 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 HIST1H2BLQ99880 126 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 TCEAL7Q9BRU2 100 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 ADAT1Q9BUB4 502 aaKnown RBP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 ZNF471Q9BX82 626 aaPredicted RBP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 TAF9BQ9HBM6 251 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 MRPL16Q9NX20 251 aaKnown RBP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 TNFSF18Q9UNG2 199 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 TMEM2Q9UHN6 1383 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 GRIN2AQ12879 1464 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 TCOF1Q13428 1488 aaKnown RBP2.05□□□□□ -2.08
PRPF4-203ENST00000488937 NISCHQ9Y2I1 1504 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 POLEQ07864 2286 aa2.05□□□□□ -2.08
PRPF4-203ENST00000488937 TRGV10A0A0A0MS01 117 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 TRAV13-1A0A0B4J241 112 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 TRBV27A0A0K0K1C4 114 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 FAM92AA1XBS5 289 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 TMEM235A6NFC5 223 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 ARHGAP32A7KAX9 2087 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 GGTLC3B5MD39 225 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 H3BPC8 53 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 TXNDC9O14530 226 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 KDM6AO15550 1401 aaPredicted RBP2.04□□□□□ -2.08
PRPF4-203ENST00000488937 IL4P05112 153 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 MSMBP08118 114 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 METTL15P1P0C7V9 234 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 FABP2P12104 132 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 RPL28P46779 137 aaKnown RBP2.04□□□□□ -2.08
PRPF4-203ENST00000488937 PLXNA3P51805 1871 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 TAF9Q16594 264 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 FAM135BQ49AJ0 1406 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 C2orf83Q53S99 150 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 OCIAD2Q56VL3 154 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 RNASE10Q5GAN6 216 aaKnown RBP2.04□□□□□ -2.08
PRPF4-203ENST00000488937 FRMPD1Q5SYB0 1578 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 NOXRED1Q6NXP6 359 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 ZNF880Q6PDB4 577 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 LYPD6Q86Y78 171 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 VPS8Q8N3P4 1428 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 OR5A2Q8NGI9 324 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 ZNF418Q8TF45 676 aaPredicted RBP2.04□□□□□ -2.08
PRPF4-203ENST00000488937 ASF1BQ9NVP2 202 aa2.04□□□□□ -2.08
PRPF4-203ENST00000488937 KIF13AQ9H1H9 1805 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 SYNJ1O43426 1573 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 YEATS2Q9ULM3 1422 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 DSPPQ9NZW4 1301 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 H3BT86 120 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 J3QR89 54 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 TP53I11O14683 189 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 NPFFO15130 113 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 HIST1H2BKO60814 126 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 TCL1BO95988 128 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 HIST1H2BJP06899 126 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 CRYGSP22914 178 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 FOXA3P55318 350 aaPredicted RBP2.03□□□□□ -2.08
PRPF4-203ENST00000488937 MAXP61244 160 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 COPZ1P61923 177 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 SUPT4H1P63272 117 aaKnown RBP2.03□□□□□ -2.08
PRPF4-203ENST00000488937 DIAPH2-AS1Q14236 149 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 CTAGE3PQ8IX95 158 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 MAGOHBQ96A72 148 aaKnown RBP2.03□□□□□ -2.08
PRPF4-203ENST00000488937 IMMP2LQ96T52 175 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 SDF2Q99470 211 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 MIEN1Q9BRT3 115 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 NPCDR1Q9BY65 106 aa2.03□□□□□ -2.08
PRPF4-203ENST00000488937 RPS10P5Q9NQ39 176 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms