RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 RPL29P47914 159 aaKnown RBP8.54□□□□□ -1.04
COL21A1-211ENST00000488912 RBX1P62877 108 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PRR20EP86478 221 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PRR20CP86479 221 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PRR20DP86480 221 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PRR20BP86481 221 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PRR20AP86496 221 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF90Q03938 601 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF726P1Q15940 193 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PDZD11Q5EBL8 140 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 DPPA3Q6W0C5 159 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 SSX7Q7RTT5 188 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
COL21A1-211ENST00000488912 GSX1Q9H4S2 264 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-211ENST00000488912 KCNIP2Q9NS61 270 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF355PQ9NSJ1 428 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 TMEM160Q9NX00 188 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 A0A1B0GV50 99 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 TRGC2P03986 189 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 LINC00869P0C866 280 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 TMEM183AQ8IXX5 376 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 OR4X1Q8NH49 305 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 FRZBQ92765 325 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 PBDC1Q9BVG4 233 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 SLC39A9Q9NUM3 307 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 THYN1Q9P016 225 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
COL21A1-211ENST00000488912 TRBV9A0A0B4J1U6 114 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 TCRBV4S1A1TA0A5B7 111 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 RHOGP84095 191 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 KLK9Q2XQG4 91 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 COA6Q5JTJ3 125 aaKnown RBP8.53□□□□□ -1.04
COL21A1-211ENST00000488912 SOHLH1Q5JUK2 328 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF343Q6P1L6 599 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 CYP2G1PQ6ZSU1 146 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 SLC25A22Q9H936 323 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 FBXL7Q9UJT9 491 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 KLK9Q9UKQ9 250 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 PUS1Q9Y606 427 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL21A1-211ENST00000488912 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
COL21A1-211ENST00000488912 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 IGHV3-23P01764 117 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 AMBPP02760 352 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 IGLC1P0CG04 106 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 C15orf32Q32M92 178 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 ACOT6Q3I5F7 207 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-211ENST00000488912 MS4A10Q96PG2 267 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 RARRES2Q99969 163 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 NPFFR1Q9GZQ6 430 aa8.53□□□□□ -1.04
COL21A1-211ENST00000488912 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-211ENST00000488912 CD99P14209 185 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 PPIFP30405 207 aaKnown RBP8.52□□□□□ -1.05
COL21A1-211ENST00000488912 SPSB3Q6PJ21 355 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 Q71RC1 249 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-211ENST00000488912 TMEM86BQ8N661 226 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 TRGV9Q99603 122 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF702PQ9H963 129 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 C21orf62Q9NYP8 219 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 H3BQ15 152 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 HMGB3O15347 200 aaKnown RBP8.52□□□□□ -1.05
COL21A1-211ENST00000488912 SRD5A1P18405 259 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 CDKN1BP46527 198 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 LCN15Q6UWW0 184 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 NECAP1Q8NC96 275 aa8.52□□□□□ -1.05
COL21A1-211ENST00000488912 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 KIR2DL5BA0A0G2JN68 375 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 KIR2DL5BA0A0G2JPC4 375 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 IGKV1-17P01599 117 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 FGF8P55075 233 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-211ENST00000488912 MFAP4P55083 255 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 CCL20P78556 96 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 CFHR3Q02985 330 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 TIGITQ495A1 244 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 C1orf194Q5T5A4 169 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 KIR2DL5AQ8N109 375 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 PRSS22Q9GZN4 317 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF580Q9UK33 172 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-211ENST00000488912 CTXND1A0A1B0GTU2 59 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 MAP1LC3B2A6NCE7 125 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 GNG7O60262 68 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
COL21A1-211ENST00000488912 CDC34P49427 236 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-211ENST00000488912 SELENOTP62341 195 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 Q56UQ5 140 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 VN1R17PQ8TDU5 208 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 MAP1LC3BQ9GZQ8 125 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
COL21A1-211ENST00000488912 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 CDC42EP3Q9UKI2 254 aa8.51□□□□□ -1.05
COL21A1-211ENST00000488912 NF1P21359 2839 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms