RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 MED6O75586 246 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 CCNKO75909 580 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 IFNA4P05014 189 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 OR10J1P30954 320 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 NKX2-1P43699 371 aaPredicted RBP4.8□□□□□ -1.64
SEC22C-215ENST00000487701 PAX9P55771 341 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 GAMTQ14353 236 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 ETFRF1Q6IPR1 90 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 NOXA1Q86UR1 476 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 SBSPONQ8IVN8 264 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 C12orf45Q8N5I9 185 aaPredicted RBP4.8□□□□□ -1.64
SEC22C-215ENST00000487701 OR1S2Q8NGQ3 325 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 NPIPB3Q92617 1050 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 ACY3Q96HD9 319 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 CIB3Q96Q77 187 aaPredicted RBP4.8□□□□□ -1.64
SEC22C-215ENST00000487701 RNF2Q99496 336 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 ASCL2Q99929 193 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 NEURL2Q9BR09 285 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 RHPN1-AS1Q9BWJ2 59 aa4.8□□□□□ -1.64
SEC22C-215ENST00000487701 TRAV30A0A087WSZ9 112 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 TRAV14DV4A0A0A6YYC5 116 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 TRAV25A0A0B4J276 109 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 IGHV3-66A0A0C4DH42 116 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 PMS2P5A8MQ11 134 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 TSPAN4O14817 238 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 MBPP02686 304 aaPredicted RBP4.79□□□□□ -1.64
SEC22C-215ENST00000487701 IL5P05113 134 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 GPX4P36969 197 aaPredicted RBP4.79□□□□□ -1.64
SEC22C-215ENST00000487701 ATP5IP56385 69 aaPredicted RBP4.79□□□□□ -1.64
SEC22C-215ENST00000487701 YPEL3P61236 119 aaPredicted RBP4.79□□□□□ -1.64
SEC22C-215ENST00000487701 IL15RAQ13261 267 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 USF2Q15853 346 aaPredicted RBP4.79□□□□□ -1.64
SEC22C-215ENST00000487701 SPANXN5Q5MJ07 72 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 FAM90A2PQ658T7 463 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 ACOT7LQ6ZUV0 252 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 DEFB125Q8N687 156 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 GINS3Q9BRX5 216 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 C11orf1Q9H5F2 150 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 VSIRQ9H7M9 311 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 GSKIPQ9P0R6 139 aa4.79□□□□□ -1.64
SEC22C-215ENST00000487701 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
SEC22C-215ENST00000487701 RBMY1BA6NDE4 496 aaKnown RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 C5orf51A6NDU8 294 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 RBMY1EA6NEQ0 496 aaKnown RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 FAM25EA8MYX2 175 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 INMT-MINDY4F8WBC2 141 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 K7EPK0 472 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 SCGB2A1O75556 95 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 DFFBO76075 338 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 TOMM40O96008 361 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 IL4P05112 153 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 RBMY1DP0C7P1 496 aaKnown RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 PSG1P11464 419 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 CRYBB3P26998 211 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 DEFA1P59665 94 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 DEFA3P59666 94 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 RAB11AP62491 216 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 ZNF90Q03938 601 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 ARL16Q0P5N6 197 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 TMEM14EPQ6UXP3 125 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 LINC00322Q6ZN03 302 aaPredicted RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 RBPMS2Q6ZRY4 209 aaKnown RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 TCF24Q7RTU0 167 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 CCDC28AQ8IWP9 274 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 THAP8Q8NA92 274 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 SLC35E1Q96K37 410 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 SMIM8Q96KF7 97 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 SPAG8Q99932 426 aaPredicted RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 MARVELD1Q9BSK0 173 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 PSENENQ9NZ42 101 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 UBQLN2Q9UHD9 624 aa4.78□□□□□ -1.64
SEC22C-215ENST00000487701 STRAPQ9Y3F4 350 aaKnown RBP4.78□□□□□ -1.64
SEC22C-215ENST00000487701 IGKV3-7A0A075B6H7 116 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 C7orf66A4D0T2 115 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 ZFP92A6NM28 416 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 SNRPGP15A8MWD9 76 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 GOSR2O14653 212 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 TSC22D2O75157 780 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 SIX6O95475 246 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 METTL15P1P0C7V9 234 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 RD3LP0DJH9 198 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 NPPCP23582 126 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 P2RY1P47900 373 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 TFPI2P48307 235 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 RPP30P78346 268 aaKnown RBP4.77□□□□□ -1.65
SEC22C-215ENST00000487701 OR2F1Q13607 317 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 HAGHQ16775 308 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 LAMTOR1Q6IAA8 161 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 OR8G2PQ6IF36 304 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 TMEM182Q6ZP80 229 aaPredicted RBP4.77□□□□□ -1.65
SEC22C-215ENST00000487701 GBGT1Q8N5D6 347 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 Q8WTZ3 238 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 GLMPQ8WWB7 406 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 C2orf50Q96LR7 162 aa4.77□□□□□ -1.65
SEC22C-215ENST00000487701 METTL26Q96S19 204 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms