RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 USF2Q15853 346 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-211ENST00000487698 STXBP6Q8NFX7 210 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 EEF1AKMT3Q96AZ1 226 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 PAXXQ9BUH6 204 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 OR51M1Q9H341 326 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
SF3B1-211ENST00000487698 GGTLC3B5MD39 225 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 DNASE2O00115 360 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-211ENST00000487698 TRGV3P03979 118 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 ATP5G2Q06055 141 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM95Q3KNT9 176 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 SIGLECL1Q8N7X8 197 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 Q8WTZ3 238 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 C11orf52Q96A22 123 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 PARLQ9H300 379 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 PUS1Q9Y606 427 aaKnown RBP eCLIP7.33□□□□□ -1.24
SF3B1-211ENST00000487698 NUPL2O15504 423 aaKnown RBP7.32□□□□□ -1.24
SF3B1-211ENST00000487698 CLEC3BP05452 202 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 RHEBQ15382 184 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 LEMD1Q68G75 181 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 RPUSD4Q96CM3 377 aaKnown RBP7.32□□□□□ -1.24
SF3B1-211ENST00000487698 SMIM7Q9BQ49 75 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 C20orf24Q9BUV8 137 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM14CQ9P0S9 112 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 ANK3Q12955 4377 aaKnown RBP7.32□□□□□ -1.24
SF3B1-211ENST00000487698 OTOGQ6ZRI0 2925 aa7.32□□□□□ -1.24
SF3B1-211ENST00000487698 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 C7orf77A4D0Y5 90 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF727A8MUV8 499 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 M0R036 132 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 TGOLN2O43493 480 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 TPPP2P59282 170 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 CLEC19AQ6UXS0 136 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF600Q6ZNG1 722 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM86BQ8N661 226 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 TVP23CQ96ET8 276 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 USMG5Q96IX5 58 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 ZFAND3Q9H8U3 227 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 SDF2L1Q9HCN8 221 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 MTORP42345 2549 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 NDUFB4O95168 129 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 IGHG4P01861 327 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 MYCNOSP40205 109 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 PNRC1Q12796 327 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-211ENST00000487698 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 PRSS22Q9GZN4 317 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 NPFFR1Q9GZQ6 430 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 KLK15Q9H2R5 256 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 NAT8Q9UHE5 227 aa7.31□□□□□ -1.24
SF3B1-211ENST00000487698 MRPS12O15235 138 aaKnown RBP7.3□□□□□ -1.24
SF3B1-211ENST00000487698 PSMB8P28062 276 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF674Q2M3X9 581 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 CBLN2Q8IUK8 224 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 Q8N2B8 174 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 YAE1D1Q9NRH1 226 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.3□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM89A2RUT3 159 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF98A6NK75 572 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 NBEAP1P0C6P0 100 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 PF4V1P10720 104 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 SRP14P37108 136 aaKnown RBP7.3□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM88Q6PEY1 159 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 TOMM20LQ6UXN7 152 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 S100A7AQ86SG5 101 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 ELOVL1Q9BW60 279 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 RPS10P5Q9NQ39 176 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 TMEM160Q9NX00 188 aa7.3□□□□□ -1.24
SF3B1-211ENST00000487698 TRBV20OR9-2A0A075B6H5 130 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 A0A087WWC5 75 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 CLPSL1A2RUU4 121 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 B4DEV8 164 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 BMPR1BO00238 502 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 IGLC2P0DOY2 106 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 HIST1H1EP10412 219 aaKnown RBP7.29□□□□□ -1.24
SF3B1-211ENST00000487698 AKR1C3P42330 323 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 RAB9AP51151 201 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF329Q86UD4 541 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 TCEAL7Q9BRU2 100 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 ZNF586Q9NXT0 402 aa7.29□□□□□ -1.24
SF3B1-211ENST00000487698 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 PPP5D1E7EU14 171 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 RPL23P62829 140 aaKnown RBP7.28□□□□□ -1.24
SF3B1-211ENST00000487698 RELQ04864 619 aaPredicted RBP7.28□□□□□ -1.24
SF3B1-211ENST00000487698 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 BPIFA4PQ86YQ2 179 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 RABAC1Q9UI14 185 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 A0A0G2JLM5 398 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 DNAJC9-AS1A6NH13 148 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 TRBV12-3P01733 135 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 SNRPCP09234 159 aaKnown RBP7.28□□□□□ -1.24
SF3B1-211ENST00000487698 HNF1AP20823 631 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 CRYBB3P26998 211 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms