RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ABCA1O95477 2261 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 G3V4G9 280 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 M0R3E3 92 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SIVA1O15304 175 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 IFI27P40305 119 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 LGALS9BQ3B8N2 356 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 LGALS9CQ6DKI2 356 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 ZNF784Q8NCA9 323 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SPINK8P0C7L1 97 aa12.47□□□□□ -0.41
HLA-DQB1-209ENST00000487676 CECR9P0C854 216 aa12.47□□□□□ -0.41
HLA-DQB1-209ENST00000487676 INTS1Q8N201 2190 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-209ENST00000487676 KLF17Q5JT82 389 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-209ENST00000487676 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PLA2G5P39877 138 aa12.47□□□□□ -0.41
HLA-DQB1-209ENST00000487676 GTSCR1Q86UQ5 136 aa12.46□□□□□ -0.41
HLA-DQB1-209ENST00000487676 C8orf46Q8TAG6 207 aa12.46□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TMEM190Q8WZ59 177 aa12.46□□□□□ -0.41
HLA-DQB1-209ENST00000487676 C2orf70A6NJV1 201 aa12.46□□□□□ -0.41
HLA-DQB1-209ENST00000487676 VGLL1Q99990 258 aa12.46□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PINLYPA6NC86 204 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 CD177Q8N6Q3 437 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 KLK15Q9H2R5 256 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 EPOPA6NHQ4 379 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 IGHV1-2P23083 117 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 KRTAP27-1Q3LI81 207 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 LINC00173Q6ZV60 143 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ASCL5Q7RTU5 278 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ZNF48Q96MX3 618 aaPredicted RBP12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ZNF747Q9BV97 191 aa12.46□□□□□ -0.42
HLA-DQB1-209ENST00000487676 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ARMS2P0C7Q2 107 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 FXYD7P58549 80 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 DPF1Q92782 380 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 RAXQ9Y2V3 346 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 GTF3C1Q12789 2109 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 TRAV8-1A0A0A6YYK1 113 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 SRRM5B3KS81 715 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 MEF2CQ06413 473 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 NDUFA3O95167 84 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 CCL8P80075 99 aa12.45□□□□□ -0.42
HLA-DQB1-209ENST00000487676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ZC2HC1BQ5TFG8 222 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ASPHD1Q5U4P2 390 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 HAX1O00165 279 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 C1RLQ9NZP8 487 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 LINC01545Q5VT33 79 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 H7C2G1 150 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 GOSR1O95249 250 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 RAB1BQ9H0U4 201 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 PROK2Q9HC23 129 aa12.44□□□□□ -0.42
HLA-DQB1-209ENST00000487676 A8MWV9 139 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 F5H697 171 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 Q86TA4 180 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 F2RL2O00254 374 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 LYZL1Q6UWQ5 148 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 WDR86Q86TI4 376 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 FAM216BQ8N7L0 139 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 MGPP08493 103 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 EXOC3-AS1Q8N2X6 119 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 DLX4Q92988 240 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
HLA-DQB1-209ENST00000487676 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 TRGV9Q99603 122 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 NUP210LQ5VU65 1888 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 COX6CP09669 75 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 CEACAM3P40198 252 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 C10orf55Q5SWW7 151 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 LHFPL4Q7Z7J7 247 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 LINC00310P59036 64 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 SP5Q6BEB4 398 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 PRSS57Q6UWY2 283 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 KIR3DL3Q8N743 410 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 RPUSD1Q9UJJ7 312 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 TRAV8-2A0A0B4J237 113 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 MFAP4P55083 255 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 SCGB3A1Q96QR1 104 aa12.42□□□□□ -0.42
HLA-DQB1-209ENST00000487676 AMN1Q8IY45 258 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 C1orf162Q8NEQ5 155 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 IGF2BP2-AS1Q96M15 143 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 PRR33A8MZF0 331 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 NCR2O95944 276 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ZNF256Q9Y2P7 627 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 EML5Q05BV3 1969 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 GLRXP35754 106 aa12.41□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ONECUT1Q9UBC0 465 aa12.4□□□□□ -0.42
HLA-DQB1-209ENST00000487676 THADAQ6YHU6 1953 aa12.4□□□□□ -0.42
HLA-DQB1-209ENST00000487676 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
HLA-DQB1-209ENST00000487676 ZC2HC1AQ96GY0 325 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms