RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 TCRAP04437 139 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 LGALS7P47929 136 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 SRSF9Q13242 221 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 DEFB109BQ30KR1 87 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 LYRM7Q5U5X0 104 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 SLC25A48Q6ZT89 311 aaKnown RBP6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 OTORQ9NRC9 128 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 NHP2Q9NX24 153 aaKnown RBP6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 KMT2EQ8IZD2 1858 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 TRAV8-1A0A0A6YYK1 113 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 IGKV1-16P04430 117 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 GLRXP35754 106 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 CTRLP40313 264 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 SP5Q6BEB4 398 aaPredicted RBP6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 IFI27L1Q96BM0 104 aa6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 EP300Q09472 2414 aaPredicted RBP6.25□□□□□ -1.41
COL6A4P1-202ENST00000487147 F2RL2O00254 374 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 NTN3O00634 580 aaPredicted RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 S100A4P26447 101 aaKnown RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 ATP1A1-AS1Q5TC04 95 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 WIPF2Q8TF74 440 aaPredicted RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 C15orf65H3BRN8 121 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 KLF5Q13887 457 aaPredicted RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 C1orf162Q8NEQ5 155 aaPredicted RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 RPUSD1Q9UJJ7 312 aaKnown RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 EML6Q6ZMW3 1958 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 PRR14LQ5THK1 2151 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 LOC107984156A0A0G2JMH3 177 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 H0YJW9 148 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 SS18L1O75177 396 aaPredicted RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 P0C879 139 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 ARL17AQ8IVW1 177 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 TEX45Q8NA69 505 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 ZNF479Q96JC4 524 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 YAE1D1Q9NRH1 226 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 SPRR3Q9UBC9 169 aa6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 COLQQ9Y215 455 aaPredicted RBP6.24□□□□□ -1.41
COL6A4P1-202ENST00000487147 PRB4P10163 310 aaPredicted RBP6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 COX8AP10176 69 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 CCL3L1P16619 93 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 ZNF134P52741 427 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 RPRMLQ8N4K4 120 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 TTC9CQ8N5M4 171 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 SLC25A2Q9BXI2 301 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 RNF114Q9Y508 228 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 A0A1B0GWB2 263 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 IL4P05112 153 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 AZU1P20160 251 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 RPS20P60866 119 aaKnown RBP6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 PSMG4Q5JS54 123 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 D6R8Y8 96 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 H3BRM9 83 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 FXYD7P58549 80 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 DAZAP2Q15038 168 aaPredicted RBP6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 EXOC3-AS1Q8N2X6 119 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 FOXC2Q99958 501 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 PSG8Q9UQ74 426 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 LINC00312Q9Y6C7 94 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 ZNF788Q6ZQV5 615 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 Q6ZR03 302 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 LINC00173Q6ZV60 143 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 BCL6BQ8N143 479 aaPredicted RBP6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 OR4A5Q8NH83 315 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 PCNX1Q96RV3 2341 aa6.23□□□□□ -1.41
COL6A4P1-202ENST00000487147 PRRG2O14669 202 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 LINC00310P59036 64 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 CT83Q5H943 113 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SHISA2Q6UWI4 295 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 ONECUT1Q9UBC0 465 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 PLCE1Q9P212 2302 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 IGHV1-18A0A0C4DH31 117 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 LY6G6EA0A0G2JKS1 128 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 H3BVH4 76 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SMAD7O15105 426 aaKnown RBP6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 ARMS2P0C7Q2 107 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 ASCL5Q7RTU5 278 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 C1orf210Q8IVY1 113 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 C8orf46Q8TAG6 207 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 GFRA4Q9GZZ7 299 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 RABAC1Q9UI14 185 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 U3KQA8 63 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 CPAMD8Q8IZJ3 1885 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SPTBN2O15020 2390 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SP9P0CG40 484 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SCGB1A1P11684 91 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 IFI27P40305 119 aaPredicted RBP6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 BRWD1-AS2P59051 145 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 Q1RN00 199 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SPANXN1Q5VSR9 72 aa6.22□□□□□ -1.41
COL6A4P1-202ENST00000487147 SAP30O75446 220 aa6.21□□□□□ -1.41
COL6A4P1-202ENST00000487147 OR11H12B2RN74 326 aa6.21□□□□□ -1.42
COL6A4P1-202ENST00000487147 RPL11P62913 178 aaKnown RBP6.21□□□□□ -1.42
COL6A4P1-202ENST00000487147 KIR3DL3Q8N743 410 aa6.21□□□□□ -1.42
COL6A4P1-202ENST00000487147 OR11H1Q8NG94 326 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms