RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 COL4A2P08572 1712 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 GUSBP1Q15486 140 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 IGF2-ASQ6U949 168 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 MGAQ8IWI9 3026 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 TPTE2P1Q5T6R2 138 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 MYO15AQ9UKN7 3530 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 TANC2Q9HCD6 1990 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 NAV3Q8IVL0 2385 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 CD33P20138 364 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 OR5AN1Q8NGI8 311 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 HLA-DQA1P01909 254 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 RIGQ13278 110 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 ZNF114Q8NC26 417 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 PMS2P5A8MQ11 134 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 COX6B1P14854 86 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 ADMP35318 185 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 UQCRFS1P47985 274 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 CX3CL1P78423 397 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 C16orf92Q96LL3 132 aa10.69□□□□□ -0.7
HMGN1-216ENST00000486741 TRBV24-1A0A075B6N3 115 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 TRAV40A0A0B4J280 105 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 A0A1W2PRE2 83 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 TMEM189A5PLL7 270 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 HIGD1CA8MV81 97 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 TRGV3P03979 118 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
HMGN1-216ENST00000486741 BRWD1-AS2P59051 145 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 NUTF2P61970 127 aaKnown RBP10.68□□□□□ -0.7
HMGN1-216ENST00000486741 OR5R1Q8NH85 324 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 RELQ04864 619 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-216ENST00000486741 COX19Q49B96 90 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 EXPH5Q8NEV8 1989 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 CPAMD8Q8IZJ3 1885 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 ITGB1BP1O14713 200 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 MT-ND6P03923 174 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 MAS1LP35410 378 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 C3orf36Q3SXR2 165 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 GRAMD2BQ96HH9 432 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 NDUFA4L2Q9NRX3 87 aa10.68□□□□□ -0.7
HMGN1-216ENST00000486741 CHD3Q12873 2000 aaKnown RBP10.68□□□□□ -0.7
HMGN1-216ENST00000486741 TRAV30A0A087WSZ9 112 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 A0A1B0GUS0 222 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 GZMBP10144 247 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 IGFL4Q6B9Z1 124 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 ZNF833PQ6ZTB9 187 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 ODF3L1Q8IXM7 274 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 METTL26Q96S19 204 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 HLA-DRB1P01911 266 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 TDGF1P3P51864 188 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-216ENST00000486741 TWIST1Q15672 202 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 IGHV2-70P01814 119 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 FOLR2P14207 255 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 RITA1Q96K30 269 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 GPR82Q96P67 336 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.67□□□□□ -0.7
HMGN1-216ENST00000486741 C22orf46C9J442 243 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 SERF1AO75920 110 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 RHOGP84095 191 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 SAPCD1Q5SSQ6 148 aa10.67□□□□□ -0.7
HMGN1-216ENST00000486741 F5H697 171 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 RPL15P61313 204 aaKnown RBP10.66□□□□□ -0.7
HMGN1-216ENST00000486741 OR8A1Q8NGG7 326 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 TGFAP01135 160 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 CD99P14209 185 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 EFNA4P52798 201 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 ATP5G2Q06055 141 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 SPATA45Q537H7 98 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 FAM162BQ5T6X4 162 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 TMEM256Q8N2U0 113 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 M0QZ24 198 aa10.66□□□□□ -0.7
HMGN1-216ENST00000486741 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
HMGN1-216ENST00000486741 NPPCP23582 126 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-216ENST00000486741 ZNF295-AS1Q8N0V1 137 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 FNDC4Q9H6D8 234 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-216ENST00000486741 TMEM242Q9NWH2 141 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 M0R3E3 92 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 DLEU1O43261 78 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 IGKV3-20P01619 116 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 DLX6P56179 175 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.7
HMGN1-216ENST00000486741 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 C11orf1Q9H5F2 150 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 LRRK2Q5S007 2527 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 CIARTQ8N365 385 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-216ENST00000486741 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-216ENST00000486741 C8orf46Q8TAG6 207 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 DPF1Q92782 380 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 E7EUB6 86 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms