RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 IL22RA2Q969J5 263 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NUDT15Q9NV35 164 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TRAV6A0A075B6T7 132 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 BUB3O43684 328 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PSG1P11464 419 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ANXA7P20073 488 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 C4orf46Q504U0 113 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ZNF767PQ75MW2 155 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 LGI3Q8N145 548 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 DTD1Q8TEA8 209 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PBDC1Q9BVG4 233 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 XCL2Q9UBD3 114 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 CELA1Q9UNI1 258 aa11.03□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PIGBOS1A0A0B4J2F0 54 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SFT2D2O95562 160 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SMCO1Q147U7 214 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 RNF125Q96EQ8 232 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 RNF126Q9BV68 326 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 RBKSQ9H477 322 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 U3KQ87 197 aa11.02□□□□□ -0.65
HLA-DQB1-208ENST00000484729 A0A0B4J2A0 478 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 ZFP92A6NM28 416 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 H3BMM0 161 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 OR4E1P0C645 316 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 NUP62P37198 522 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 LYZL2Q7Z4W2 148 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SEPSECSQ9HD40 501 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SHPKQ9UHJ6 478 aa11.01□□□□□ -0.65
HLA-DQB1-208ENST00000484729 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 DEFB131BA0A096LNP1 70 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 C9orf170A2RU37 121 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 P0DMU3 169 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 FAM231AP0DMU4 169 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 FAM231CP0DMU5 169 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 HLA-DRB4P13762 266 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 OR1S1Q8NH92 325 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 COQ8AQ8NI60 647 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 PFDN2Q9UHV9 154 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 HLA-DRB4X5D2U9 266 aa11□□□□□ -0.65
HLA-DQB1-208ENST00000484729 DUXBA0A1W2PPF3 345 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 IGKV3-20P01619 116 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 AMBPP02760 352 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 NKX2-1P43699 371 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 LYZP61626 148 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 ZNF90Q03938 601 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 C12orf74Q32Q52 190 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 LGALS9BQ3B8N2 356 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 OR8G2PQ6IF36 304 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 LINC00052Q96N35 136 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 HSPG2P98160 4391 aa10.99□□□□□ -0.65
HLA-DQB1-208ENST00000484729 AGRNO00468 2067 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 IGHV3OR16-12A0A075B7B8 117 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 FABP1P07148 127 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 FXYD7P58549 80 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 DEFB1P60022 68 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 GAMTQ14353 236 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 PPP1R14BQ96C90 147 aa10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 PAIP2BQ9ULR5 123 aaKnown RBP10.98□□□□□ -0.65
HLA-DQB1-208ENST00000484729 HOXB5P09067 269 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 GPX4P36969 197 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 ID1P41134 155 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 EMP1P54849 157 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 ATP5IP56385 69 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 OR2F1Q13607 317 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 MAPKAPK5-AS1Q8N8E1 139 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SEC22CQ9BRL7 303 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 NDUFAF3Q9BU61 184 aa10.97□□□□□ -0.65
HLA-DQB1-208ENST00000484729 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 IAPPP10997 89 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 PSMB3P49720 205 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 GSG1LQ6UXU4 331 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 Q6ZR54 194 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SAV1Q9H4B6 383 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 TMED3Q9Y3Q3 217 aa10.96□□□□□ -0.65
HLA-DQB1-208ENST00000484729 SNRPGP15A8MWD9 76 aa10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 PTTG1O95997 202 aa10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 IFNA21P01568 189 aa10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 RAB11AP62491 216 aa10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 C1orf194Q5T5A4 169 aa10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 ZNF705AQ6ZN79 300 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 ZNF431Q8TF32 576 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 GPN1Q9HCN4 374 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB1-208ENST00000484729 TMEM189A5PLL7 270 aa10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 ZNF705FA8MVS1 300 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 INMT-MINDY4F8WBC2 141 aa10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 SOCS3O14543 225 aa10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 ADAP1O75689 374 aa10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 ZNF705DP0CH99 300 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 ZNF705BP0CI00 300 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-208ENST00000484729 SPART-AS1P0CW21 52 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms