RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ZP3P21754 424 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-204ENST00000483941 TAGLN2P37802 199 aaKnown RBP10.79□□□□□ -0.68
SMAD9-204ENST00000483941 DEFA5Q01523 94 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 KIAA0141Q14154 515 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-204ENST00000483941 C4orf3Q8WVX3 66 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 RAB24Q969Q5 203 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 MED9Q9NWA0 146 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 RABAC1Q9UI14 185 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 PUS1Q9Y606 427 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMAD9-204ENST00000483941 MAP1LC3B2A6NCE7 125 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 CXorf1O96002 111 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 IFNA1P01562 189 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 C8orf88P0DMB2 117 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 BMI1P35226 326 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 ADMP35318 185 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 KHDC3LQ587J8 217 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 IL34Q6ZMJ4 242 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 PQLC2Q6ZP29 291 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 LINC00305Q7Z4B0 112 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 GPHB5Q86YW7 130 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 LYPD6BQ8NI32 183 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 WIPF2Q8TF74 440 aaPredicted RBP10.78□□□□□ -0.68
SMAD9-204ENST00000483941 METTL26Q96S19 204 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 PBDC1Q9BVG4 233 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 MAP1LC3BQ9GZQ8 125 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 HRH4Q9H3N8 390 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 VSIRQ9H7M9 311 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
SMAD9-204ENST00000483941 RFNGQ9Y644 331 aa10.78□□□□□ -0.68
SMAD9-204ENST00000483941 KMT2CQ8NEZ4 4911 aaKnown RBP10.77□□□□□ -0.68
SMAD9-204ENST00000483941 ANKRD34BA5PLL1 514 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 PSMB3P49720 205 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 FHITP49789 147 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 PROK1P58294 105 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 RPEL1Q2QD12 228 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 KHDC1LQ5JSQ8 128 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 C10orf99Q6UWK7 81 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 TOMM20LQ6UXN7 152 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 TMEM37Q8WXS4 190 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 DPF1Q92782 380 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 TMEM167BQ9NRX6 74 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.69
SMAD9-204ENST00000483941 DOK5Q9P104 306 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 NBEAL2Q6ZNJ1 2754 aa10.77□□□□□ -0.69
SMAD9-204ENST00000483941 LINC00862A6NCI5 91 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 PPP5D1E7EU14 171 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 STAG3L2P0CL84 134 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 STAG3L3P0CL85 134 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 NPPCP23582 126 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 PMS2P11Q13670 270 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 GCSAMLQ5JQS6 135 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 LCN15Q6UWW0 184 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 MARC2Q969Z3 335 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 SEPSECSQ9HD40 501 aaKnown RBP10.76□□□□□ -0.69
SMAD9-204ENST00000483941 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
SMAD9-204ENST00000483941 A0A1W2PS18 150 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 K7EMT4 169 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 HIST2H2BDQ6DRA6 164 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 GRAMD2BQ96HH9 432 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 GPR82Q96P67 336 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 SHANK2-AS3Q9BTD1 123 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 SLC25A39Q9BZJ4 359 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-204ENST00000483941 SMDT1Q9H4I9 107 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 TMEM231Q9H6L2 316 aa10.75□□□□□ -0.69
SMAD9-204ENST00000483941 RAB19A4D1S5 217 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 LINC01619G3V211 115 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 I3L521 148 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 RPL7P18124 248 aaKnown RBP10.74□□□□□ -0.69
SMAD9-204ENST00000483941 ZNF726P1Q15940 193 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 C1orf194Q5T5A4 169 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 PATE2Q6UY27 113 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 BPIFA4PQ86YQ2 179 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 KLHL30-AS1Q8NEE0 82 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 OR5B12Q96R08 314 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 MANBALQ9NQG1 85 aa10.74□□□□□ -0.69
SMAD9-204ENST00000483941 ZNF320A2RRD8 509 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 LGALS9O00182 355 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 OR7C2O60412 319 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 CD28P10747 220 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 USF2Q15853 346 aaPredicted RBP10.73□□□□□ -0.69
SMAD9-204ENST00000483941 TCTEX1D4Q5JR98 221 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 UQCC3Q6UW78 93 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 MIR17HGQ75NE6 70 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 REC114Q7Z4M0 266 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 C1QL4Q86Z23 238 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 IQCF2Q8IXL9 164 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 SUN5Q8TC36 379 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 ELOVL1Q9BW60 279 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
SMAD9-204ENST00000483941 OR51M1Q9H341 326 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms