RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 EDA2RQ9HAV5 297 aa8.46□□□□□ -1.06
RAPGEF1-207ENST00000481260 IGKV1D-37A0A075B6S9 117 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 FAM74A7A6NL05 159 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 H3BP45 60 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 CORTO00230 105 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 OR4E1P0C645 316 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 RPL35AP18077 110 aaKnown RBP8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 OR10J1P30954 320 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 SRPXP78539 464 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 USF2Q15853 346 aaPredicted RBP8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 FAM74A3Q4VXF1 159 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 C4orf46Q504U0 113 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 RNASEH2CQ8TDP1 164 aaKnown RBP8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 ZMAT4Q9H898 229 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
RAPGEF1-207ENST00000481260 F8W036 122 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 WRBO00258 174 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 CCSO14618 274 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 SNAPINO95295 136 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 SIX6O95475 246 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 ZNF90Q03938 601 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 GAMTQ14353 236 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 LYG2Q86SG7 212 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 STPG3Q8N7X2 389 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 SPATA25Q9BR10 227 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 SEC11CQ9BY50 192 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 MS4A6AQ9H2W1 248 aa8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 SAV1Q9H4B6 383 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF1-207ENST00000481260 HYDINQ4G0P3 5121 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 IGKV1OR2-108A0A075B7D4 117 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 DUXBA0A1W2PPF3 345 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 PRSS46E5RG02 174 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 S100A8P05109 93 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 SMIM6P0DI80 62 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 PVALBP20472 110 aaPredicted RBP8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 CRYBB3P26998 211 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 POLR2GP62487 172 aaKnown RBP eCLIP8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 EIF5AP63241 154 aaKnown RBP8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 CYCSP99999 105 aaKnown RBP8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 TMEM182Q6ZP80 229 aaPredicted RBP8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 OR1S2Q8NGQ3 325 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 MITD1Q8WV92 249 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 GGTLC1Q9BX51 225 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 TMED3Q9Y3Q3 217 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 U3KQE9 123 aa8.43□□□□□ -1.06
RAPGEF1-207ENST00000481260 LOC102724200A0A096LPH7 203 aaPredicted RBP8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 PSG1P11464 419 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 SLC25A6P12236 298 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 LYL1P12980 280 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 P2RY1P47900 373 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 MEOX2P50222 304 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 PAX9P55771 341 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 EWSR1Q01844 656 aaKnown RBP eCLIP8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 LEMD1Q68G75 181 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 OR51G1Q8NGK1 321 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 MUC7Q8TAX7 377 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 THAP6Q8TBB0 222 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 RNF141Q8WVD5 230 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 OVOL2Q9BRP0 275 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 GINS3Q9BRX5 216 aa8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
RAPGEF1-207ENST00000481260 OR4C46A6NHA9 309 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 SYNGR2O43760 224 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 SSSCA1O60232 199 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 IL4P05112 153 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 NPPCP23582 126 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 GATA2P23769 480 aaPredicted RBP8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 YPEL3P61236 119 aaPredicted RBP8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 RPL11P62913 178 aaKnown RBP8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 ID3Q02535 119 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 SPANXN5Q5MJ07 72 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 INO80EQ8NBZ0 244 aaPredicted RBP8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 GLMPQ8WWB7 406 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 METTL26Q96S19 204 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 C12orf57Q99622 126 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 NMES1Q9C002 83 aa8.41□□□□□ -1.06
RAPGEF1-207ENST00000481260 PMS2P5A8MQ11 134 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 FAM90A26D6RGX4 464 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 TOMM40O96008 361 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 RD3LP0DJH9 198 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 DEFB131AP59861 70 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 DEFB1P60022 68 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 DEFB135Q30KP9 77 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 C16orf54Q6UWD8 224 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 BAP18Q8IXM2 172 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 Q8WTZ3 238 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 RABAC1Q9UI14 185 aa8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
RAPGEF1-207ENST00000481260 TRAV30A0A087WSZ9 112 aa8.39□□□□□ -1.07
RAPGEF1-207ENST00000481260 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
RAPGEF1-207ENST00000481260 K7EQG2 157 aa8.39□□□□□ -1.07
RAPGEF1-207ENST00000481260 SCGB1D2O95969 90 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms