RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 FAM120AOSQ5T036 256 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 SPATA31B1PQ5VZV4 182 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 LY6G5BQ8NDX9 201 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 TPSG1Q9NRR2 321 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 HSPB8Q9UJY1 196 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 FABP5P3A8MUU1 101 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 RPL23P62829 140 aaKnown RBP15.38■□□□□ 0.05
CCM2-214ENST00000481194 VAMP3Q15836 100 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 C1orf194Q5T5A4 169 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 SGK494Q96LW2 274 aa15.38■□□□□ 0.05
CCM2-214ENST00000481194 PRSS57Q6UWY2 283 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 KLHL30-AS1Q8NEE0 82 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 TUBA4BQ9H853 241 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 PMS2P11Q13670 270 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 NSUN5P1Q3KNT7 163 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 DEFB112Q30KQ8 113 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 MED12LQ86YW9 2145 aa15.37■□□□□ 0.05
CCM2-214ENST00000481194 ZNF343Q6P1L6 599 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 MRPL18Q9H0U6 180 aaKnown RBP15.36■□□□□ 0.05
CCM2-214ENST00000481194 NCKAP5O14513 1909 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 TRAV21A0A0B4J279 112 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 PMS2P5A8MQ11 134 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 CGB3P0DN86 165 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 CGB7P0DN87 165 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 GNG5P63218 68 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 NDUFA4O00483 81 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 ZFP36P26651 326 aaKnown RBP15.36■□□□□ 0.05
CCM2-214ENST00000481194 CKS2P33552 79 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 IMMP2LQ96T52 175 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 STHQ8IWL8 128 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 Q8N7P7 452 aa15.36■□□□□ 0.05
CCM2-214ENST00000481194 PPP1R17O96001 155 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 PKDREJQ9NTG1 2253 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 ZNF329Q86UD4 541 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 TGIF2-C20orf24A0A0A6YYL0 155 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 INS-IGF2F8WCM5 200 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 C11orf42Q8N5U0 333 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 KIAA2026Q5HYC2 2103 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 LINC01619G3V211 115 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 CSN3P07498 182 aa15.35■□□□□ 0.05
CCM2-214ENST00000481194 IGLC7A0M8Q6 106 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 HOXA3O43365 443 aaPredicted RBP15.34■□□□□ 0.05
CCM2-214ENST00000481194 RPL15P61313 204 aaKnown RBP15.34■□□□□ 0.05
CCM2-214ENST00000481194 YLPM1P49750 1951 aaKnown RBP15.34■□□□□ 0.05
CCM2-214ENST00000481194 VWC2Q2TAL6 325 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 ZNF841Q6ZN19 808 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 NCOA6Q14686 2063 aaPredicted RBP15.34■□□□□ 0.05
CCM2-214ENST00000481194 IZUMO1RA6ND01 250 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 TMEM97Q5BJF2 176 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 ODF3L1Q8IXM7 274 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 MAP1LC3CQ9BXW4 147 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 GSX1Q9H4S2 264 aaPredicted RBP15.34■□□□□ 0.05
CCM2-214ENST00000481194 OR5AL1P0C617 328 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 MAP1LC3AQ9H492 121 aa15.34■□□□□ 0.05
CCM2-214ENST00000481194 DGAT2L7PQ6IED9 249 aa15.33■□□□□ 0.05
CCM2-214ENST00000481194 GTSCR1Q86UQ5 136 aa15.33■□□□□ 0.05
CCM2-214ENST00000481194 SMIM12Q96EX1 92 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 G3V318 75 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 TCF21O43680 179 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 TCRAP04437 139 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 LMO4P61968 165 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 A0A1B0GUT8 65 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 ELOBQ15370 118 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 MLANAQ16655 118 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 LCNL1Q6ZST4 164 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 TMEM242Q9NWH2 141 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 TMEM14CQ9P0S9 112 aa15.33■□□□□ 0.04
CCM2-214ENST00000481194 FREM1Q5H8C1 2179 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 IGHV3OR16-12A0A075B7B8 117 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 LINC00477Q96M19 166 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 PTPRQQ9UMZ3 2332 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 H7C1H1 209 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 IGHV4-38-2P0DP08 117 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 RNASE4P34096 147 aaKnown RBP15.32■□□□□ 0.04
CCM2-214ENST00000481194 FER1L6-AS1Q8NA97 138 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 RHPN1-AS1Q9BWJ2 59 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 CACNG7P62955 275 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 MYOZ3Q8TDC0 251 aa15.32■□□□□ 0.04
CCM2-214ENST00000481194 IGKV3-20P01619 116 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 DUX3Q96PT4 197 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 TMEM191AQ9H0A3 160 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 ROS1P08922 2347 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 SAP30O75446 220 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 IGLV2-14P01704 120 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 RPL13AP40429 203 aaKnown RBP15.31■□□□□ 0.04
CCM2-214ENST00000481194 ODF3BA8MYP8 253 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 NPIPB6E9PJ23 425 aa15.31■□□□□ 0.04
CCM2-214ENST00000481194 NDUFS6O75380 124 aaKnown RBP15.3■□□□□ 0.04
CCM2-214ENST00000481194 CD81P60033 236 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 SRSF3P84103 164 aaKnown RBP15.3■□□□□ 0.04
CCM2-214ENST00000481194 CADP27708 2225 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 TRGV11A0A075B6L2 103 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 TRGC2P03986 189 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 OR1N2Q8NGR9 330 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 Q1RN00 199 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 NRGNQ92686 78 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 TCAPO15273 167 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 NDUFA3O95167 84 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 HAPLN4Q86UW8 402 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 Q6ZN92 141 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms