RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GPX4P36969 197 aaPredicted RBP11□□□□□ -0.65
LIMS3-203ENST00000480744 FXYD7P58549 80 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 DEFB1P60022 68 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 OR2F1Q13607 317 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 GAMTQ14353 236 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 OR8G2PQ6IF36 304 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 C9orf170A2RU37 121 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 FABP1P07148 127 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 NKX2-1P43699 371 aaPredicted RBP10.99□□□□□ -0.65
LIMS3-203ENST00000480744 ATP5IP56385 69 aaPredicted RBP10.99□□□□□ -0.65
LIMS3-203ENST00000480744 GDF5OSQ5U4N7 250 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 GSG1LQ6UXU4 331 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 LRTM2Q8N967 370 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 COQ8AQ8NI60 647 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 C20orf85Q9H1P6 137 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
LIMS3-203ENST00000480744 IGHV3OR16-12A0A075B7B8 117 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 DEFB131BA0A096LNP1 70 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 PIGBOS1A0A0B4J2F0 54 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 TCRBP04435 133 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 OR4E1P0C645 316 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 ID1P41134 155 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 UBE2MP61081 183 aaKnown RBP10.98□□□□□ -0.65
LIMS3-203ENST00000480744 RAB11AP62491 216 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 ASAH1Q13510 395 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 C12orf74Q32Q52 190 aa10.98□□□□□ -0.65
LIMS3-203ENST00000480744 DUXBA0A1W2PPF3 345 aa10.97□□□□□ -0.65
LIMS3-203ENST00000480744 SNRPGP15A8MWD9 76 aa10.97□□□□□ -0.65
LIMS3-203ENST00000480744 EMP1P54849 157 aa10.97□□□□□ -0.65
LIMS3-203ENST00000480744 OR4B1Q8NGF8 309 aa10.97□□□□□ -0.65
LIMS3-203ENST00000480744 RNF126Q9BV68 326 aa10.97□□□□□ -0.65
LIMS3-203ENST00000480744 TRAV6A0A075B6T7 132 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 PITX3O75364 302 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 MED6O75586 246 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 ADAP1O75689 374 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 PSMB3P49720 205 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 C1orf194Q5T5A4 169 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 OR8I2Q8N0Y5 310 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 TRGV9Q99603 122 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 SAV1Q9H4B6 383 aaPredicted RBP10.96□□□□□ -0.65
LIMS3-203ENST00000480744 NUDT15Q9NV35 164 aa10.96□□□□□ -0.65
LIMS3-203ENST00000480744 HOXB5P09067 269 aa10.95□□□□□ -0.66
LIMS3-203ENST00000480744 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
LIMS3-203ENST00000480744 ZNF705AQ6ZN79 300 aaPredicted RBP10.95□□□□□ -0.66
LIMS3-203ENST00000480744 SCRT1Q9BWW7 348 aa10.95□□□□□ -0.66
LIMS3-203ENST00000480744 F6UB75 175 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 WRBO00258 174 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 SOCS3O14543 225 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 AMBPP02760 352 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 RPP30P78346 268 aaKnown RBP10.94□□□□□ -0.66
LIMS3-203ENST00000480744 C4orf46Q504U0 113 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 CIB3Q96Q77 187 aaPredicted RBP10.94□□□□□ -0.66
LIMS3-203ENST00000480744 SEC22CQ9BRL7 303 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 NDUFAF3Q9BU61 184 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 SLC35B3Q9H1N7 401 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 SLC25A22Q9H936 323 aa10.94□□□□□ -0.66
LIMS3-203ENST00000480744 IGKV1OR2-108A0A075B7D4 117 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 FAM240BA0A1B0GVZ2 78 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 ZNF705FA8MVS1 300 aaPredicted RBP10.93□□□□□ -0.66
LIMS3-203ENST00000480744 ISLRO14498 428 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 SYNGR2O43760 224 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 ZNF705DP0CH99 300 aaPredicted RBP10.93□□□□□ -0.66
LIMS3-203ENST00000480744 ZNF705BP0CI00 300 aaPredicted RBP10.93□□□□□ -0.66
LIMS3-203ENST00000480744 SPART-AS1P0CW21 52 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 SLC25A6P12236 298 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 AKR1C1Q04828 323 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 C16orf92Q96LL3 132 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 NEU1Q99519 415 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 SLC25A32Q9H2D1 315 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 TMED3Q9Y3Q3 217 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 RFNGQ9Y644 331 aa10.93□□□□□ -0.66
LIMS3-203ENST00000480744 TMEM189A5PLL7 270 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 SMIM9A6NGZ8 99 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 H3BP45 60 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 H2AFB2P0C5Z0 115 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 GALR1P47211 349 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 PSG9Q00887 426 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 SPANXN5Q5MJ07 72 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 FAM78BQ5VT40 261 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 SPATA31B1PQ5VZV4 182 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 MZT2BQ6NZ67 158 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 ZNF709Q8N972 641 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 RPRMQ9NS64 109 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 GOLT1BQ9Y3E0 138 aa10.92□□□□□ -0.66
LIMS3-203ENST00000480744 HECTD4Q9Y4D8 3996 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 CFDP00746 253 aaPredicted RBP10.91□□□□□ -0.66
LIMS3-203ENST00000480744 P0DMU3 169 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 FAM231AP0DMU4 169 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 FAM231CP0DMU5 169 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 ORM2P19652 201 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 GATA2P23769 480 aaPredicted RBP10.91□□□□□ -0.66
LIMS3-203ENST00000480744 MEOX2P50222 304 aa10.91□□□□□ -0.66
LIMS3-203ENST00000480744 SAMD13Q5VXD3 122 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms