RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ZNF502Q8TBZ5 544 aa8.55□□□□□ -1.04
SIK3-210ENST00000480468 SGK494Q96LW2 274 aa8.55□□□□□ -1.04
SIK3-210ENST00000480468 SPAG8Q99932 426 aaPredicted RBP8.55□□□□□ -1.04
SIK3-210ENST00000480468 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
SIK3-210ENST00000480468 DOCK7Q96N67 2140 aa8.55□□□□□ -1.04
SIK3-210ENST00000480468 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 K7EQM0 130 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 CELA3AP09093 270 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 IFI27P40305 119 aaPredicted RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 PAX8Q06710 450 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 ABHD17BQ5VST6 288 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 SMRP1Q8NCR6 262 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 IGKV1D-17A0A075B6S4 117 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 HLA-DRB4P13762 266 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 GCSHP23434 173 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 NMUP48645 174 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 SSBP2P81877 361 aaPredicted RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 MZT1Q08AG7 82 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 WFDC2Q14508 124 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 ZCCHC24Q8N2G6 241 aaKnown RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 RBMXL3Q8N7X1 1067 aaKnown RBP8.54□□□□□ -1.04
SIK3-210ENST00000480468 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 FSCN3Q9NQT6 498 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 HLA-DRB4X5D2U9 266 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 DYSFO75923 2080 aa8.54□□□□□ -1.04
SIK3-210ENST00000480468 SRRM5B3KS81 715 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 IGHV3-13P01766 116 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 GP9P14770 177 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 LOXL1Q08397 574 aaPredicted RBP8.53□□□□□ -1.04
SIK3-210ENST00000480468 SRSF6Q13247 344 aaKnown RBP8.53□□□□□ -1.04
SIK3-210ENST00000480468 C17orf58Q2M2W7 97 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 NPIPB3Q92617 1050 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 RITA1Q96K30 269 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 C12orf49Q9H741 205 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
SIK3-210ENST00000480468 SPAARA0A1B0GVQ0 90 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 SAA1P0DJI8 122 aaPredicted RBP8.53□□□□□ -1.04
SIK3-210ENST00000480468 C5orf64Q2M2E5 130 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 TMEM30BQ3MIR4 351 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 CHAC1Q9BUX1 264 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 Q9H3A6 140 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 OTORQ9NRC9 128 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
SIK3-210ENST00000480468 WDR87Q6ZQQ6 2873 aa8.53□□□□□ -1.04
SIK3-210ENST00000480468 PI4KAP42356 2102 aa8.52□□□□□ -1.04
SIK3-210ENST00000480468 CACNA1EQ15878 2313 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 IGLL5B9A064 214 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 FAM106CPP0CH98 169 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 CFHR2P36980 270 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 SUB1P53999 127 aaKnown RBP eCLIP8.52□□□□□ -1.05
SIK3-210ENST00000480468 FAM106AQ4KMX7 169 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 INO80CQ6PI98 192 aaPredicted RBP8.52□□□□□ -1.05
SIK3-210ENST00000480468 TTC9CQ8N5M4 171 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 OSR1Q8TAX0 266 aaPredicted RBP8.52□□□□□ -1.05
SIK3-210ENST00000480468 ZMAT4Q9H898 229 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 F11RQ9Y624 299 aaKnown RBP8.52□□□□□ -1.05
SIK3-210ENST00000480468 A6NJY4 79 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 TIMM8AO60220 97 aaPredicted RBP8.52□□□□□ -1.05
SIK3-210ENST00000480468 TSPAN13O95857 204 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 IGLV2-11P01706 119 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 THBDP07204 575 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 TAL2Q16559 108 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 UTF1Q5T230 341 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 SPINK14Q6IE38 97 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 Q6ZS92 163 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 CEND1Q8N111 149 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 ZNF418Q8TF45 676 aaPredicted RBP8.52□□□□□ -1.05
SIK3-210ENST00000480468 LEAP2Q969E1 77 aa8.52□□□□□ -1.05
SIK3-210ENST00000480468 PCSK5Q92824 1860 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 PLAUP00749 431 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 IGKV1-16P04430 117 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 MAGEA5P43359 124 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 ETDBQ3ZM63 59 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 CIARTQ8N365 385 aaPredicted RBP8.51□□□□□ -1.05
SIK3-210ENST00000480468 SRSF12Q8WXF0 261 aaKnown RBP8.51□□□□□ -1.05
SIK3-210ENST00000480468 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 TTTY12Q9BZ98 90 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 DOCK10Q96BY6 2186 aa8.51□□□□□ -1.05
SIK3-210ENST00000480468 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
SIK3-210ENST00000480468 ZNF785A8K8V0 405 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 OR11H12B2RN74 326 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 NDUFS7O75251 213 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 TM4SF20Q53R12 229 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 ATP6V0E2Q8NHE4 81 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 TRGV9Q99603 122 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 LINC00574Q9H8X3 128 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms