RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 BMPR1BO00238 502 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 TSPAN4O14817 238 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 TGOLN2O43493 480 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 CD5LO43866 347 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 NDUFB4O95168 129 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 IGLV1-40P01703 118 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 NBEAP1P0C6P0 100 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 PYYP10082 97 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 ADMP35318 185 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 MYCNOSP40205 109 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 BLCAPP62952 87 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 BPIFA4PQ86YQ2 179 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 CCDC140Q96MF4 163 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 C20orf24Q9BUV8 137 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 APCP25054 2843 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 SCO2A0A1W2PP80 73 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 OR2T8A6NH00 312 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 MT-ND4LP03901 98 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 TRGV3P03979 118 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 CD99P14209 185 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 GPR183P32249 361 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 RPL23P62829 140 aaKnown RBP8.56□□□□□ -1.04
VTI1A-204ENST00000480057 KIAA0141Q14154 515 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-204ENST00000480057 USF2Q15853 346 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-204ENST00000480057 TMEM88Q6PEY1 159 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 LYPD1Q8N2G4 141 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 OR4F17Q8NGA8 305 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 HIST1H2BAQ96A08 127 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 PRSS22Q9GZN4 317 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 NPFFR1Q9GZQ6 430 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 RABAC1Q9UI14 185 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 S4R3C0 116 aa8.56□□□□□ -1.04
VTI1A-204ENST00000480057 POLQO75417 2590 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 ZNF98A6NK75 572 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 PPP1R2P9O14990 202 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 IGHV3-23P01764 117 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 IGHG4P01861 327 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 CLEC3BP05452 202 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
VTI1A-204ENST00000480057 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 RPL7P18124 248 aaKnown RBP8.55□□□□□ -1.04
VTI1A-204ENST00000480057 TPPP2P59282 170 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 TAS2R60P59551 318 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
VTI1A-204ENST00000480057 SCGB2A2Q13296 93 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 PDE6HQ13956 83 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 CLEC19AQ6UXS0 136 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 ZNF329Q86UD4 541 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 CIARTQ8N365 385 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-204ENST00000480057 C2CD4CQ8TF44 421 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 GPR82Q96P67 336 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 MS4A10Q96PG2 267 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 CHRDL1Q9BU40 450 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 ELOVL1Q9BW60 279 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 ZFAND3Q9H8U3 227 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
VTI1A-204ENST00000480057 TMEM160Q9NX00 188 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 ABCA12Q86UK0 2595 aa8.55□□□□□ -1.04
VTI1A-204ENST00000480057 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.54□□□□□ -1.04
VTI1A-204ENST00000480057 CLDN34H7C241 214 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
VTI1A-204ENST00000480057 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-204ENST00000480057 HNF1AP20823 631 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 CRYBB3P26998 211 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 KRTAP1-1Q07627 177 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 ADIRFQ15847 76 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 C1orf194Q5T5A4 169 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 LINC01551Q86U37 167 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 Q8N2B8 174 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-204ENST00000480057 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 SMIM12Q96EX1 92 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 ZNF414Q96IQ9 312 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 YPEL4Q96NS1 127 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
VTI1A-204ENST00000480057 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 ABCA1O95477 2261 aa8.54□□□□□ -1.04
VTI1A-204ENST00000480057 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 HELTA6NFD8 242 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 COLCA2A8K830 154 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 PEX7O00628 323 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 SMAD7O15105 426 aaKnown RBP8.53□□□□□ -1.04
VTI1A-204ENST00000480057 ZNF253O75346 499 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 AKR1C3P42330 323 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 RPL35P42766 123 aaKnown RBP8.53□□□□□ -1.04
VTI1A-204ENST00000480057 CNN1P51911 297 aaKnown RBP8.53□□□□□ -1.04
VTI1A-204ENST00000480057 SLC35B1P78383 322 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 RNF212Q495C1 297 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 Q6ZS46 218 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 ISOC2Q96AB3 205 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 NOL4LQ96MY1 436 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-204ENST00000480057 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
VTI1A-204ENST00000480057 LINC00527Q9UJ94 153 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms