RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 IGHG3P01860 377 aa8.81□□□□□ -1
CHD6-208ENST00000480022 LINC00205P59089 165 aa8.81□□□□□ -1
CHD6-208ENST00000480022 GNG3P63215 75 aa8.81□□□□□ -1
CHD6-208ENST00000480022 WFDC2Q14508 124 aa8.81□□□□□ -1
CHD6-208ENST00000480022 ACP7Q6ZNF0 438 aa8.81□□□□□ -1
CHD6-208ENST00000480022 GCSAMQ8N6F7 178 aa8.81□□□□□ -1
CHD6-208ENST00000480022 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
CHD6-208ENST00000480022 OR11H1Q8NG94 326 aa8.81□□□□□ -1
CHD6-208ENST00000480022 OR11H2Q8NH07 326 aa8.81□□□□□ -1
CHD6-208ENST00000480022 SOX21Q9Y651 276 aaPredicted RBP8.81□□□□□ -1
CHD6-208ENST00000480022 ZNHIT1O43257 154 aa8.81□□□□□ -1
CHD6-208ENST00000480022 FAM53AQ6NSI3 398 aaPredicted RBP8.81□□□□□ -1
CHD6-208ENST00000480022 ZNF562Q6V9R5 426 aa8.81□□□□□ -1
CHD6-208ENST00000480022 PLPPR2Q96GM1 343 aa8.81□□□□□ -1
CHD6-208ENST00000480022 SIGLEC8Q9NYZ4 499 aa8.81□□□□□ -1
CHD6-208ENST00000480022 EML6Q6ZMW3 1958 aa8.81□□□□□ -1
CHD6-208ENST00000480022 TRGV5A0A0B4J1U4 118 aa8.81□□□□□ -1
CHD6-208ENST00000480022 ZNF418Q8TF45 676 aaPredicted RBP8.81□□□□□ -1
CHD6-208ENST00000480022 BBC3Q96PG8 261 aaPredicted RBP8.81□□□□□ -1
CHD6-208ENST00000480022 SPRR3Q9UBC9 169 aa8.81□□□□□ -1
CHD6-208ENST00000480022 AMMECR1Q9Y4X0 333 aaPredicted RBP8.81□□□□□ -1
CHD6-208ENST00000480022 INSIG2Q9Y5U4 225 aa8.81□□□□□ -1
CHD6-208ENST00000480022 KBTBD11-OT1A0A1B0GTJ5 212 aa8.8□□□□□ -1
CHD6-208ENST00000480022 NGFP01138 241 aa8.8□□□□□ -1
CHD6-208ENST00000480022 DUTP33316 252 aaKnown RBP8.8□□□□□ -1
CHD6-208ENST00000480022 SSBP2P81877 361 aaPredicted RBP8.8□□□□□ -1
CHD6-208ENST00000480022 RNF125Q96EQ8 232 aa8.8□□□□□ -1
CHD6-208ENST00000480022 HARBI1Q96MB7 349 aa8.8□□□□□ -1
CHD6-208ENST00000480022 C19orf24Q9BVV8 132 aa8.8□□□□□ -1
CHD6-208ENST00000480022 A8MWL6 223 aa8.8□□□□□ -1
CHD6-208ENST00000480022 C12orf77C9JDV5 145 aa8.8□□□□□ -1
CHD6-208ENST00000480022 CHEK1O14757 476 aa8.8□□□□□ -1
CHD6-208ENST00000480022 CSN3P07498 182 aa8.8□□□□□ -1
CHD6-208ENST00000480022 CSN1S1P47710 185 aa8.8□□□□□ -1
CHD6-208ENST00000480022 ZNF137PP52743 207 aa8.8□□□□□ -1
CHD6-208ENST00000480022 GTSF1Q8WW33 167 aa8.8□□□□□ -1
CHD6-208ENST00000480022 EPG5Q9HCE0 2579 aa8.8□□□□□ -1
CHD6-208ENST00000480022 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
CHD6-208ENST00000480022 J3QT63 122 aa8.79□□□□□ -1
CHD6-208ENST00000480022 MGST3O14880 152 aa8.79□□□□□ -1
CHD6-208ENST00000480022 ATP5G2Q06055 141 aa8.79□□□□□ -1
CHD6-208ENST00000480022 ETDBQ3ZM63 59 aa8.79□□□□□ -1
CHD6-208ENST00000480022 AP5S1Q9NUS5 200 aa8.79□□□□□ -1
CHD6-208ENST00000480022 JPT1Q9UK76 154 aa8.79□□□□□ -1
CHD6-208ENST00000480022 MPC1Q9Y5U8 109 aa8.79□□□□□ -1
CHD6-208ENST00000480022 HCFC1P51610 2035 aa8.79□□□□□ -1
CHD6-208ENST00000480022 A0A1W2PRD5 423 aa8.79□□□□□ -1
CHD6-208ENST00000480022 A0A1W2PRF3 423 aa8.79□□□□□ -1
CHD6-208ENST00000480022 A0A1W2PRM7 423 aa8.79□□□□□ -1
CHD6-208ENST00000480022 PEX7O00628 323 aa8.79□□□□□ -1
CHD6-208ENST00000480022 FCGR3BO75015 233 aa8.79□□□□□ -1
CHD6-208ENST00000480022 C8orf88P0DMB2 117 aa8.79□□□□□ -1
CHD6-208ENST00000480022 GATA4P43694 442 aa8.79□□□□□ -1
CHD6-208ENST00000480022 C5orf47Q569G3 176 aa8.79□□□□□ -1
CHD6-208ENST00000480022 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
CHD6-208ENST00000480022 C7orf69Q9H7B7 122 aa8.79□□□□□ -1
CHD6-208ENST00000480022 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
CHD6-208ENST00000480022 TCF19Q9Y242 345 aa8.79□□□□□ -1
CHD6-208ENST00000480022 TRGV8A0A0C4DH27 118 aa8.78□□□□□ -1
CHD6-208ENST00000480022 UBE2L3P68036 154 aaKnown RBP8.78□□□□□ -1
CHD6-208ENST00000480022 NRN1LQ496H8 165 aa8.78□□□□□ -1
CHD6-208ENST00000480022 GGNQ86UU5 652 aa8.78□□□□□ -1
CHD6-208ENST00000480022 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
CHD6-208ENST00000480022 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
CHD6-208ENST00000480022 ONECUT1Q9UBC0 465 aa8.78□□□□□ -1
CHD6-208ENST00000480022 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
CHD6-208ENST00000480022 CACNA1BQ00975 2339 aa8.78□□□□□ -1
CHD6-208ENST00000480022 TMEM30CPA0ZSE6 113 aa8.78□□□□□ -1
CHD6-208ENST00000480022 APOHP02749 345 aaPredicted RBP8.78□□□□□ -1
CHD6-208ENST00000480022 GCSHP23434 173 aa8.78□□□□□ -1
CHD6-208ENST00000480022 ERVK-16P61578 105 aa8.78□□□□□ -1
CHD6-208ENST00000480022 TMEM177Q53S58 311 aa8.78□□□□□ -1
CHD6-208ENST00000480022 ARPC1AQ92747 370 aa8.78□□□□□ -1
CHD6-208ENST00000480022 OOEPA6NGQ2 149 aa8.77□□□□□ -1
CHD6-208ENST00000480022 FNDC10F2Z333 226 aa8.77□□□□□ -1
CHD6-208ENST00000480022 DNPH1O43598 174 aa8.77□□□□□ -1
CHD6-208ENST00000480022 CT45A6P0DMU7 189 aa8.77□□□□□ -1
CHD6-208ENST00000480022 CT45A5P0DMU8 189 aa8.77□□□□□ -1
CHD6-208ENST00000480022 CT45A7P0DMV0 189 aa8.77□□□□□ -1
CHD6-208ENST00000480022 TNFRSF1AP19438 455 aa8.77□□□□□ -1
CHD6-208ENST00000480022 TCTAP57738 103 aa8.77□□□□□ -1
CHD6-208ENST00000480022 C3AR1Q16581 482 aa8.77□□□□□ -1
CHD6-208ENST00000480022 CT45A1Q5HYN5 189 aa8.77□□□□□ -1
CHD6-208ENST00000480022 C8orf86Q6ZUL3 223 aa8.77□□□□□ -1
CHD6-208ENST00000480022 CT45A3Q8NHU0 189 aa8.77□□□□□ -1
CHD6-208ENST00000480022 SLC25A33Q9BSK2 321 aa8.77□□□□□ -1
CHD6-208ENST00000480022 PSG8Q9UQ74 426 aa8.77□□□□□ -1
CHD6-208ENST00000480022 TLN1Q9Y490 2541 aaKnown RBP8.77□□□□□ -1.01
CHD6-208ENST00000480022 PRB1P04280 392 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 SRYQ05066 204 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 LGALS9BQ3B8N2 356 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 LGALS9CQ6DKI2 356 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 Q8IYB0 196 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 TTC9CQ8N5M4 171 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 OR8A1Q8NGG7 326 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 C18orf15Q96N68 181 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 CYSLTR1Q9Y271 337 aa8.77□□□□□ -1.01
CHD6-208ENST00000480022 F11RQ9Y624 299 aaKnown RBP8.77□□□□□ -1.01
CHD6-208ENST00000480022 KALRNO60229 2985 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms