RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PEF1Q9UBV8 284 aaKnown RBP16.61■□□□□ 0.25
COL13A1-208ENST00000479733 LAMA5O15230 3695 aa16.61■□□□□ 0.25
COL13A1-208ENST00000479733 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
COL13A1-208ENST00000479733 LTAP01374 205 aa16.61■□□□□ 0.25
COL13A1-208ENST00000479733 SUB1P53999 127 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL13A1-208ENST00000479733 PKDREJQ9NTG1 2253 aa16.61■□□□□ 0.25
COL13A1-208ENST00000479733 CACNA1GO43497 2377 aa16.61■□□□□ 0.25
COL13A1-208ENST00000479733 FAM231BA6NCW3 169 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 GAGE10A6NGK3 116 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 EXOC3-AS1Q8N2X6 119 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 C5orf17Q8NAS9 161 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 NEU4Q8WWR8 484 aaPredicted RBP16.6■□□□□ 0.25
COL13A1-208ENST00000479733 RITA1Q96K30 269 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 NDFIP1Q9BT67 221 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 K7ERU9 68 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 SRSF6Q13247 344 aaKnown RBP16.6■□□□□ 0.25
COL13A1-208ENST00000479733 C2orf91Q6ZV80 131 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 GOLT1AQ6ZVE7 132 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 ZCCHC24Q8N2G6 241 aaKnown RBP16.6■□□□□ 0.25
COL13A1-208ENST00000479733 CSTL1Q9H114 145 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 PLSCR4Q9NRQ2 329 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 COL27A1Q8IZC6 1860 aaPredicted RBP16.6■□□□□ 0.25
COL13A1-208ENST00000479733 DMXL2Q8TDJ6 3036 aa16.6■□□□□ 0.25
COL13A1-208ENST00000479733 FXYD7P58549 80 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 OR8A1Q8NGG7 326 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 OR10X1Q8NGY0 326 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 FMC1Q96HJ9 113 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 A0A1W2PPI3 338 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 ENSAO43768 121 aaKnown RBP16.59■□□□□ 0.25
COL13A1-208ENST00000479733 FAM106CPP0CH98 169 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 CCL8P80075 99 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 FAM106AQ4KMX7 169 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 ZNF833PQ6ZTB9 187 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 AP5S1Q9NUS5 200 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 HILPDAQ9Y5L2 63 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 LOC389332A0A1B0GUA5 103 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 PRR33A8MZF0 331 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 ARMS2P0C7Q2 107 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 PRSS3P2Q8NHM4 247 aa16.59■□□□□ 0.25
COL13A1-208ENST00000479733 SRSF12Q8WXF0 261 aaKnown RBP16.59■□□□□ 0.25
COL13A1-208ENST00000479733 WT1P19544 449 aaPredicted RBP16.58■□□□□ 0.24
COL13A1-208ENST00000479733 FAM71F2Q6NXP2 309 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 ZNF788Q6ZQV5 615 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 STXBP6Q8NFX7 210 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 MS4A6AQ9H2W1 248 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 RAI1Q7Z5J4 1906 aaPredicted RBP16.58■□□□□ 0.24
COL13A1-208ENST00000479733 SP9P0CG40 484 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 COX8AP10176 69 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 THAP8Q8NA92 274 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 FDCSPQ8NFU4 85 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 OR4C13Q8NGP0 309 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 SOX21Q9Y651 276 aaPredicted RBP16.58■□□□□ 0.24
COL13A1-208ENST00000479733 TECTAO75443 2155 aa16.58■□□□□ 0.24
COL13A1-208ENST00000479733 IGHV1-46P01743 117 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 IGLC1P0CG04 106 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 TMEM97Q5BJF2 176 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 LINC01545Q5VT33 79 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 C1orf210Q8IVY1 113 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 FAM222BQ8WU58 562 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 NKX2-8O15522 239 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 IGHG3P01860 377 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 DEFB123Q8N688 67 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 OR5AN1Q8NGI8 311 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 TMEM167AQ8TBQ9 72 aa16.57■□□□□ 0.24
COL13A1-208ENST00000479733 GLRXP35754 106 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 RPS20P60866 119 aaKnown RBP16.56■□□□□ 0.24
COL13A1-208ENST00000479733 CT83Q5H943 113 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 FA2HQ7L5A8 372 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 RAB37Q96AX2 223 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 AP1S3Q96PC3 154 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 NCOR1P1Q9H4R4 102 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 GP9P14770 177 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 ZNF747Q9BV97 191 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 LYZP61626 148 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 LOXL1Q08397 574 aaPredicted RBP16.56■□□□□ 0.24
COL13A1-208ENST00000479733 ZNF492Q9P255 531 aa16.56■□□□□ 0.24
COL13A1-208ENST00000479733 H3BUT2 72 aa16.55■□□□□ 0.24
COL13A1-208ENST00000479733 PRB3Q04118 309 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-208ENST00000479733 Q86TA4 180 aa16.55■□□□□ 0.24
COL13A1-208ENST00000479733 UBALD2Q8IYN6 164 aa16.55■□□□□ 0.24
COL13A1-208ENST00000479733 DKK4Q9UBT3 224 aa16.55■□□□□ 0.24
COL13A1-208ENST00000479733 TM4SF5O14894 197 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 WFDC8Q8IUA0 241 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 SMIM12Q96EX1 92 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 GFRA4Q9GZZ7 299 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 RABAC1Q9UI14 185 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 A0A1B0GUT8 65 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 SERTM2A0A1B0GWG4 89 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 HAX1O00165 279 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 NHLH1Q02575 133 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 VSTM2AQ8TAG5 236 aa16.54■□□□□ 0.24
COL13A1-208ENST00000479733 IFI27P40305 119 aaPredicted RBP16.53■□□□□ 0.24
COL13A1-208ENST00000479733 LINC00312Q9Y6C7 94 aa16.53■□□□□ 0.24
COL13A1-208ENST00000479733 RPRMLQ8N4K4 120 aa16.53■□□□□ 0.24
COL13A1-208ENST00000479733 JMJD8Q96S16 334 aa16.53■□□□□ 0.24
COL13A1-208ENST00000479733 TACC2O95359 2948 aa16.53■□□□□ 0.24
COL13A1-208ENST00000479733 IGLV2-23P01705 113 aa16.52■□□□□ 0.24
COL13A1-208ENST00000479733 FER1L6-AS1Q8NA97 138 aa16.52■□□□□ 0.24
COL13A1-208ENST00000479733 TNFRSF1AP19438 455 aa16.52■□□□□ 0.24
COL13A1-208ENST00000479733 CSN1S1P47710 185 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms