RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ATP6V0CP27449 155 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 PSMB8P28062 276 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 CNN1P51911 297 aaKnown RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 PTTG1IPP53801 180 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ELLP55199 621 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 UBE2G2P60604 165 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 GNB1P62873 340 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 PAFAH1B2P68402 229 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 CX3CL1P78423 397 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 CCL20P78556 96 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ID3Q02535 119 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 UBE2V1Q13404 147 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 RTL8BQ17RB0 113 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ETFRF1Q6IPR1 90 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 SLC25A24Q6NUK1 477 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 LINC01551Q86U37 167 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 PDPNQ86YL7 162 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ODF3L1Q8IXM7 274 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 H1FOOQ8IZA3 346 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 FAM89BQ8N5H3 189 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ZNF491Q8N8L2 437 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 OR4B1Q8NGF8 309 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 FANCD2OSQ96PS1 177 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 TP53RKQ96S44 253 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 HDHD3Q9BSH5 251 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 ALKBH7Q9BT30 221 aaPredicted RBP5.15□□□□□ -1.59
VCP-205ENST00000479300 ELOVL1Q9BW60 279 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 MAP1LC3BQ9GZQ8 125 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 C11orf1Q9H5F2 150 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 SLC35D1Q9NTN3 355 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 OR1A1Q9P1Q5 309 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 NAT8Q9UHE5 227 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.59
VCP-205ENST00000479300 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 A0A0A6YYD4 124 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 A0A0G2JLM5 398 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 F6UZH7 168 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 LINC01619G3V211 115 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 H0YJW9 148 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 MPPED1O15442 326 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 SAP30O75446 220 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 CA2P00918 260 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 IGLV1-40P01703 118 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 TRGV3P03979 118 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 BCL2P10415 239 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 ESDP10768 282 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 PPIFP30405 207 aaKnown RBP5.14□□□□□ -1.59
VCP-205ENST00000479300 LGALS7P47929 136 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 TPPP2P59282 170 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 RUNX1Q01196 453 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 EWSR1Q01844 656 aaKnown RBP eCLIP5.14□□□□□ -1.59
VCP-205ENST00000479300 CFHR3Q02985 330 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 BAXQ07812 192 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 FHL3Q13643 280 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 PSG5Q15238 335 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 ASPHD1Q5U4P2 390 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 ZNF562Q6V9R5 426 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 CYP2G1PQ6ZSU1 146 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 OR5AN1Q8NGI8 311 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 OR51G1Q8NGK1 321 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 ARPC1AQ92747 370 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 ADTRPQ96IZ2 230 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 RITA1Q96K30 269 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 MS4A10Q96PG2 267 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 OR4C12Q96R67 309 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 VAMP8Q9BV40 100 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 MAGT1Q9H0U3 335 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 OR2D2Q9H210 308 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 EDA2RQ9HAV5 297 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 PRR13Q9NZ81 148 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 EHFQ9NZC4 300 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 HSPB7Q9UBY9 170 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 SLC45A2Q9UMX9 530 aa5.14□□□□□ -1.59
VCP-205ENST00000479300 ZNF256Q9Y2P7 627 aaPredicted RBP5.14□□□□□ -1.59
VCP-205ENST00000479300 TRAV30A0A087WSZ9 112 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 H7BYZ3 331 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 CCL25O15444 150 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 SLC25A17O43808 307 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 ACTL6BO94805 426 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 CDS2O95674 445 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 SCGB1D2O95969 90 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 LGALS1P09382 135 aaKnown RBP5.13□□□□□ -1.59
VCP-205ENST00000479300 CTXN2P0C2S0 81 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 FRMD6-AS1P0C7T7 363 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
VCP-205ENST00000479300 BMI1P35226 326 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 GALR1P47211 349 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 CEBPGP53567 150 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 TMEM50BP56557 158 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 RAB11AP62491 216 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 SRPXP78539 464 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 TMEM187Q14656 261 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 FXYD3Q14802 87 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 VMA21Q3ZAQ7 101 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 KCNIP4Q6PIL6 250 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 OR2C3Q8N628 320 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 ZNF738Q8NE65 137 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 OR4D5Q8NGN0 318 aa5.13□□□□□ -1.59
VCP-205ENST00000479300 MBD3L1Q8WWY6 194 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms