RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 C1orf198Q9H425 327 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 METTL8Q9H825 291 aaKnown RBP2.88□□□□□ -1.95
CCDC171-207ENST00000478913 RHOFQ9HBH0 211 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 PARP11Q9NR21 331 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 IGHV2OR16-5A0A0B4J2B6 119 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 SMCO3A2RU48 225 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 LINC00587B1AMM8 73 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 BHLHE40O14503 412 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 NPFFO15130 113 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 FGF16O43320 207 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 ERI3O43414 337 aaKnown RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 ENSAO43768 121 aaKnown RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 RPP14O95059 124 aaKnown RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 CST4P01036 141 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 IFNA5P01569 189 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 MAS1P04201 325 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 CD3DP04234 171 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 TLX1NBP0CAT3 122 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 STAG3L2P0CL84 134 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 HLA-GP17693 338 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 MSR1P21757 451 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 HIST1H1TP22492 207 aaPredicted RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 CXCR1P25024 350 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 HTR2CP28335 458 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 AQP2P41181 271 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 NAA10P41227 235 aaPredicted RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 H2BFSP57053 126 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 TAS2R60P59551 318 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 S100A10P60903 97 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 RAP1AP62834 184 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 DHRS2Q13268 280 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 INSL4Q14641 139 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 EBPQ15125 230 aaKnown RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 OR1Q1Q15612 314 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 NNATQ16517 81 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM155Q4W5P6 130 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 FAM74A1Q5RGS3 127 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 LY6G6FQ5SQ64 297 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 C10orf91Q5T1B1 145 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 SLC48A1Q6P1K1 146 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 DNM1P34Q6PK57 102 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 SLC16A13Q7RTY0 426 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 DCXRQ7Z4W1 244 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 ANGPTL5Q86XS5 388 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 CHST4Q8NCG5 386 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 OR10R2Q8NGX6 335 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 OR51A7Q8NH64 312 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 MFSD8Q8NHS3 518 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 CASTOR1Q8WTX7 329 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 PPP1R1CQ8WVI7 109 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 PTX4Q96A99 478 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 FAM3DQ96BQ1 224 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 CPNE2Q96FN4 548 aaPredicted RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 BTF3L4Q96K17 158 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 PGLYRP3Q96LB9 341 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 DERL3Q96Q80 235 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 TSPAN32Q96QS1 320 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 STACQ99469 402 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 TAF9BQ9HBM6 251 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM100Q9NV29 134 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 RAB22AQ9UL26 194 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 C14orf166Q9Y224 244 aaKnown RBP2.87□□□□□ -1.95
CCDC171-207ENST00000478913 IER3IP1Q9Y5U9 82 aa2.87□□□□□ -1.95
CCDC171-207ENST00000478913 A0A0A6YYD5 115 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 IGLV1-36A0A0B4J1U3 117 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 A0A1B0GTI1 187 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 C9orf170A2RU37 121 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 B4DEV8 164 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 UMAD1C9J7I0 102 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 K7EPK0 472 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 M0QZK8 103 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 EIF4E2O60573 245 aaKnown RBP2.86□□□□□ -1.95
CCDC171-207ENST00000478913 GGCTO75223 188 aaKnown RBP2.86□□□□□ -1.95
CCDC171-207ENST00000478913 IFNA1P01562 189 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 HBE1P02100 147 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 CD14P08571 375 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 IFI6P09912 130 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 CD79AP11912 226 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 NQO2P16083 231 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 CBR1P16152 277 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 AKR1C4P17516 323 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 KITLGP21583 273 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 FGF7P21781 194 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 TAS2R46P59540 309 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 SPCS3P61009 180 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 BTN3A2P78410 334 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 H3F3AP84243 136 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF616Q08AN1 781 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 RSU1Q15404 277 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 LRRC75BQ2VPJ9 315 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM128Q5BJH2 165 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 PRSS54Q6PEW0 395 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 LINC00322Q6ZN03 302 aaPredicted RBP2.86□□□□□ -1.95
CCDC171-207ENST00000478913 TRAPPC6BQ86SZ2 158 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 UBE2DNLQ8IWF7 75 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 C17orf78Q8N4C9 275 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 ARRDC1Q8N5I2 433 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 JAGN1Q8N5M9 183 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF283Q8N7M2 679 aa2.86□□□□□ -1.95
CCDC171-207ENST00000478913 CYB561A3Q8NBI2 242 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms