RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 PRRC2AP48634 2157 aaKnown RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 TRBV24-1A0A075B6N3 115 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 TRAV9-1A0A075B6T8 112 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 TRBV7-1A0A0A6YYK4 115 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 TRBV9A0A0B4J1U6 114 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 TRAV40A0A0B4J280 105 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 FBLL1A6NHQ2 334 aaKnown RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 FAM223BA6NKX1 122 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 GNG7O60262 68 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 IGKV1-17P01599 117 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 PSG1P11464 419 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 S100PP25815 95 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 SRP14P37108 136 aaKnown RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 ATP5G3P48201 142 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 CEBPGP53567 150 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 RPL23P62829 140 aaKnown RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 NDPQ00604 133 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 ZNF90Q03938 601 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 PDE6HQ13956 83 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 MLANAQ16655 118 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 ZNF343Q6P1L6 599 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 TMEM88Q6PEY1 159 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 PATE2Q6UY27 113 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 FAM223AQ8IWN6 122 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 OR5R1Q8NH85 324 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 YPEL4Q96NS1 127 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 ZNF355PQ9NSJ1 428 aa5.24□□□□□ -1.57
LDB3-206ENST00000477489 MRPL36Q9P0J6 103 aaKnown RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 MRPL27Q9P0M9 148 aaKnown RBP5.24□□□□□ -1.57
LDB3-206ENST00000477489 SERTM2A0A1B0GWG4 89 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 WI2-2373I1.2A0A1W2PRP0 233 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 TMEM89A2RUT3 159 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 A6NDX4 124 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 H7BYZ3 331 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 NUPL2O15504 423 aaKnown RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 NDUFB4O95168 129 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 IGHG2P01859 326 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 OR10J4P0C629 311 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 HIST1H1EP10412 219 aaKnown RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 EGR2P11161 476 aaPredicted RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 RAB5AP20339 215 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 GATA2P23769 480 aaPredicted RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 MYCNOSP40205 109 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 MEOX2P50222 304 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 RAB5BP61020 215 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 RPL19P84098 196 aaKnown RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 ADIRFQ15847 76 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 SPATA31B1PQ5VZV4 182 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 KCNIP4Q6PIL6 250 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 UNQ5815/PRO19632Q6UWF5 114 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 LINC01551Q86U37 167 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 BPIFA4PQ86YQ2 179 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 OR1B1Q8NGR6 318 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 PIFOQ8TCI5 191 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 C17orf50Q8WW18 174 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 ISOC2Q96AB3 205 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 EEF1AKMT3Q96AZ1 226 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 FXYD5Q96DB9 178 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 RNF125Q96EQ8 232 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 ZNF503Q96F45 646 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 GPR82Q96P67 336 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 OR5B12Q96R08 314 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 SHANK2-AS3Q9BTD1 123 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 C20orf24Q9BUV8 137 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 PRDM13Q9H4Q3 707 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 MLXQ9UH92 298 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 CDC42EP3Q9UKI2 254 aa5.23□□□□□ -1.57
LDB3-206ENST00000477489 TMA7Q9Y2S6 64 aaKnown RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 YTHDF2Q9Y5A9 579 aaKnown RBP5.23□□□□□ -1.57
LDB3-206ENST00000477489 TRAV41A0A0B4J266 112 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 TRBV6-1A0A0K0K1D8 114 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 A0A0U1RQK1 487 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 C1orf196B1AJZ1 125 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 H3BRN7 92 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 BMPR1BO00238 502 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 ATP6V0E1O15342 81 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 ZNF253O75346 499 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 FSHBP01225 129 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 TYMSP04818 313 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 NBEAP1P0C6P0 100 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 GP9P14770 177 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 RPL7P18124 248 aaKnown RBP5.22□□□□□ -1.57
LDB3-206ENST00000477489 ATF4P18848 351 aaPredicted RBP5.22□□□□□ -1.57
LDB3-206ENST00000477489 ORM2P19652 201 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 NPPCP23582 126 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 CD24P25063 80 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 CNN1P51911 297 aaKnown RBP5.22□□□□□ -1.57
LDB3-206ENST00000477489 UBE2G2P60604 165 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 RELQ04864 619 aaPredicted RBP5.22□□□□□ -1.57
LDB3-206ENST00000477489 FOXL1Q12952 345 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 ELOBQ15370 118 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 TIGITQ495A1 244 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 Q56UQ5 140 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 FAM120AOSQ5T036 256 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 ZNF600Q6ZNG1 722 aa5.22□□□□□ -1.57
LDB3-206ENST00000477489 ZNF491Q8N8L2 437 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms