RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 IGHG4P01861 327 aa13.14□□□□□ -0.31
EPHB4-204ENST00000477446 AREGP15514 252 aa13.14□□□□□ -0.31
EPHB4-204ENST00000477446 GCHFRP30047 84 aa13.14□□□□□ -0.31
EPHB4-204ENST00000477446 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
EPHB4-204ENST00000477446 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
EPHB4-204ENST00000477446 DOK5Q9P104 306 aa13.14□□□□□ -0.31
EPHB4-204ENST00000477446 IGLC7A0M8Q6 106 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 TGOLN2O43493 480 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 IGLV1-40P01703 118 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 OR5G3P0C626 314 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 RND2P52198 227 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 TEX38Q6PEX7 206 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 TTC9CQ8N5M4 171 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 C11orf44Q8N8P7 122 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 OR1P1Q8NH06 330 aa13.13□□□□□ -0.31
EPHB4-204ENST00000477446 IGKV1OR2-108A0A075B7D4 117 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 REG1AP05451 166 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 CRYGCP07315 174 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 CD28P10747 220 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 HIST2H2BDQ6DRA6 164 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 C3orf56Q8N813 242 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
EPHB4-204ENST00000477446 RPUSD4Q96CM3 377 aaKnown RBP13.12□□□□□ -0.31
EPHB4-204ENST00000477446 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 PFDN5Q99471 154 aa13.12□□□□□ -0.31
EPHB4-204ENST00000477446 SEPSECSQ9HD40 501 aaKnown RBP13.12□□□□□ -0.31
EPHB4-204ENST00000477446 PSMB8P28062 276 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 FOXE3Q13461 319 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 ELOBQ15370 118 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 ZNF674Q2M3X9 581 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 OR1L6Q8NGR2 347 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 UHRF2Q96PU4 802 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 ZNF747Q9BV97 191 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 NPIPB5A8MRT5 1133 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 ELANEP08246 267 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 PF4V1P10720 104 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 DEFA4P12838 97 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 RPL23P62829 140 aaKnown RBP13.11□□□□□ -0.31
EPHB4-204ENST00000477446 MLANAQ16655 118 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 C19orf35Q6ZS72 473 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 ACY3Q96HD9 319 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 CITED1Q99966 193 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 KLK15Q9H2R5 256 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 DNAJC4Q9NNZ3 241 aa13.11□□□□□ -0.31
EPHB4-204ENST00000477446 STAB1Q9NY15 2570 aa13.1□□□□□ -0.31
EPHB4-204ENST00000477446 C8orf88P0DMB2 117 aa13.1□□□□□ -0.31
EPHB4-204ENST00000477446 ADIRFQ15847 76 aa13.1□□□□□ -0.31
EPHB4-204ENST00000477446 RNF152Q8N8N0 203 aa13.1□□□□□ -0.31
EPHB4-204ENST00000477446 MS4A10Q96PG2 267 aa13.1□□□□□ -0.31
EPHB4-204ENST00000477446 FNDC4Q9H6D8 234 aaPredicted RBP13.1□□□□□ -0.31
EPHB4-204ENST00000477446 ZNF355PQ9NSJ1 428 aa13.1□□□□□ -0.31
EPHB4-204ENST00000477446 F11RQ9Y624 299 aaKnown RBP13.1□□□□□ -0.31
EPHB4-204ENST00000477446 RPLP1P05386 114 aaKnown RBP13.09□□□□□ -0.31
EPHB4-204ENST00000477446 RAB9AP51151 201 aa13.09□□□□□ -0.31
EPHB4-204ENST00000477446 UBE2G2P60604 165 aa13.09□□□□□ -0.31
EPHB4-204ENST00000477446 MIR17HGQ75NE6 70 aa13.09□□□□□ -0.31
EPHB4-204ENST00000477446 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
EPHB4-204ENST00000477446 TRGV9Q99603 122 aa13.09□□□□□ -0.31
EPHB4-204ENST00000477446 CITED2Q99967 270 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-204ENST00000477446 ELOA3CA0A087WX78 387 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-204ENST00000477446 H3BUA1 57 aa13.08□□□□□ -0.32
EPHB4-204ENST00000477446 BRI3O95415 125 aa13.08□□□□□ -0.32
EPHB4-204ENST00000477446 ATP5G3P48201 142 aa13.08□□□□□ -0.32
EPHB4-204ENST00000477446 SPATA31B1PQ5VZV4 182 aa13.08□□□□□ -0.32
EPHB4-204ENST00000477446 TMEM116Q8NCL8 245 aa13.08□□□□□ -0.32
EPHB4-204ENST00000477446 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
EPHB4-204ENST00000477446 TRBV24-1A0A075B6N3 115 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 S100A6P06703 90 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 NPPCP23582 126 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 KIAA0141Q14154 515 aaPredicted RBP13.07□□□□□ -0.32
EPHB4-204ENST00000477446 Q8WTZ3 238 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 LY96Q9Y6Y9 160 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 NDUFB4O95168 129 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 TRGV3P03979 118 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 S100PP25815 95 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 TPPP2P59282 170 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 SMUG1Q53HV7 270 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 SHISA2Q6UWI4 295 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 MYOZ3Q8TDC0 251 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 MISP3Q96FF7 219 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 BTF3L4Q96K17 158 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 OR5B12Q96R08 314 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 DMRT1Q9Y5R6 373 aa13.07□□□□□ -0.32
EPHB4-204ENST00000477446 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 TRBV9A0A0B4J1U6 114 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 H7BYZ3 331 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 RPS10P46783 165 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms