RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 TNFRSF18Q9Y5U5 241 aa6.74□□□□□ -1.33
COL4A5-204ENST00000477429 C3orf85A0A1B0GTC6 90 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 SMR3BP02814 79 aaPredicted RBP6.73□□□□□ -1.33
COL4A5-204ENST00000477429 PGAM2P15259 253 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
COL4A5-204ENST00000477429 HTR2BP41595 481 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 PSMB3P49720 205 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 ESRGQ1W209 222 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 SPINK13Q1W4C9 94 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 LPCAT3Q6P1A2 487 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 SNX29P2Q8IUI4 249 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 RNF125Q96EQ8 232 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 Q9H3A6 140 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 ZNF586Q9NXT0 402 aa6.73□□□□□ -1.33
COL4A5-204ENST00000477429 TRAV12-2A0A075B6T6 113 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 LYRM9A8MSI8 78 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 SLC25A4P12235 298 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 UCP1P25874 307 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 ALDH3B2P48448 385 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 SPCS3P61009 180 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 TRIM16LQ309B1 348 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 SLC24A4Q8NFF2 622 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 OR11H7Q8NGC8 314 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 COQ8AQ8NI60 647 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 PDCD10Q9BUL8 212 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 ENY2Q9NPA8 101 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 HEYLQ9NQ87 328 aaPredicted RBP6.72□□□□□ -1.33
COL4A5-204ENST00000477429 CACNG5Q9UF02 275 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 BLOC1S6Q9UL45 172 aa6.72□□□□□ -1.33
COL4A5-204ENST00000477429 IGKV1OR2-108A0A075B7D4 117 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 HOXA5P20719 270 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 S100GP29377 79 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 CNN1P51911 297 aaKnown RBP6.71□□□□□ -1.34
COL4A5-204ENST00000477429 CCL18P55774 89 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 LINC00315P59091 139 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 LSM3P62310 102 aaKnown RBP6.71□□□□□ -1.34
COL4A5-204ENST00000477429 OR2F1Q13607 317 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 NMSQ5H8A3 153 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 SELENOHQ8IZQ5 122 aaKnown RBP6.71□□□□□ -1.34
COL4A5-204ENST00000477429 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 OR13C8Q8NGS7 320 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 RNASEH2CQ8TDP1 164 aaKnown RBP6.71□□□□□ -1.34
COL4A5-204ENST00000477429 GLYATL2Q8WU03 294 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 TMEM208Q9BTX3 173 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.34
COL4A5-204ENST00000477429 DOK5Q9P104 306 aa6.71□□□□□ -1.34
COL4A5-204ENST00000477429 A0A0J9YY99 117 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 CBY3A6NI87 242 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 ISLRO14498 428 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 CD3DP04234 171 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 ATP5G1P05496 136 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 OR5AC1P0C628 307 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 RCVRNP35243 200 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 ID1P41134 155 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 ATP5G3P48201 142 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 LYZP61626 148 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 GAMTQ14353 236 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 NEDD8Q15843 81 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 EBLN2Q6P2I7 272 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 TMEM182Q6ZP80 229 aaPredicted RBP6.7□□□□□ -1.34
COL4A5-204ENST00000477429 OR52E5Q8NH55 327 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 MARCH1Q8TCQ1 289 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 FCGR1BQ92637 280 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 RTBDNQ9BSG5 229 aaPredicted RBP6.7□□□□□ -1.34
COL4A5-204ENST00000477429 SLC25A32Q9H2D1 315 aa6.7□□□□□ -1.34
COL4A5-204ENST00000477429 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 CEBPZOSA8MTT3 80 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 GSTZ1O43708 216 aaPredicted RBP6.69□□□□□ -1.34
COL4A5-204ENST00000477429 CDS2O95674 445 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 SUPT4H1P63272 117 aaKnown RBP6.69□□□□□ -1.34
COL4A5-204ENST00000477429 CLINT1Q14677 625 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 OR8G2PQ6IF36 304 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 FAAP20Q6NZ36 180 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 SYT8Q8NBV8 401 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 OR4C16Q8NGL9 310 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 RRNAD1Q96FB5 475 aaKnown RBP6.69□□□□□ -1.34
COL4A5-204ENST00000477429 ZNF486Q96H40 463 aaPredicted RBP6.69□□□□□ -1.34
COL4A5-204ENST00000477429 TMEM222Q9H0R3 208 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
COL4A5-204ENST00000477429 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.69□□□□□ -1.34
COL4A5-204ENST00000477429 COMMD3Q9UBI1 195 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 DNAH8Q96JB1 4490 aa6.69□□□□□ -1.34
COL4A5-204ENST00000477429 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
COL4A5-204ENST00000477429 ZNF701M0R085 212 aaPredicted RBP6.68□□□□□ -1.34
COL4A5-204ENST00000477429 HPGDSO60760 199 aa6.68□□□□□ -1.34
COL4A5-204ENST00000477429 SCGB2A1O75556 95 aa6.68□□□□□ -1.34
COL4A5-204ENST00000477429 INSP01308 110 aa6.68□□□□□ -1.34
COL4A5-204ENST00000477429 GATA2P23769 480 aaPredicted RBP6.68□□□□□ -1.34
COL4A5-204ENST00000477429 TSPOP30536 169 aa6.68□□□□□ -1.34
COL4A5-204ENST00000477429 KLF9Q13886 244 aaPredicted RBP6.68□□□□□ -1.34
COL4A5-204ENST00000477429 SPATA31B1PQ5VZV4 182 aa6.68□□□□□ -1.34
COL4A5-204ENST00000477429 OR52I2Q8NH67 350 aa6.68□□□□□ -1.34
COL4A5-204ENST00000477429 RNASE11Q8TAA1 199 aaKnown RBP6.68□□□□□ -1.34
COL4A5-204ENST00000477429 ABHD1Q96SE0 405 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms