RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 C19orf25Q9UFG5 118 aaPredicted RBP3.34□□□□□ -1.87
CD55-208ENST00000476590 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.87
CD55-208ENST00000476590 KLK5Q9Y337 293 aaPredicted RBP3.34□□□□□ -1.87
CD55-208ENST00000476590 PTPRSQ13332 1948 aa3.34□□□□□ -1.87
CD55-208ENST00000476590 TDRD6O60522 2096 aaKnown RBP3.34□□□□□ -1.87
CD55-208ENST00000476590 PHF3Q92576 2039 aaKnown RBP3.34□□□□□ -1.88
CD55-208ENST00000476590 SCN3AQ9NY46 2000 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 TMED7-TICAM2A0A0A6YYA0 188 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 FAM236DA0A1B0GTK5 79 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 A0A1B0GWA3 101 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 C17orf51A8MQB3 221 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 SHISA9B4DS77 424 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 C16orf97H3BN30 126 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 LMX1BO60663 402 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 SRSF10O75494 262 aaKnown RBP3.34□□□□□ -1.88
CD55-208ENST00000476590 IL4P05112 153 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 CD7P09564 240 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 CT62P0C5K7 136 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 FAM236CP0DP71 79 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 IGFBP6P24592 240 aaPredicted RBP3.34□□□□□ -1.88
CD55-208ENST00000476590 MFAP2P55001 183 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 KRTAP10-9P60411 292 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 CFHR1Q03591 330 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 LINC01620Q4KN68 170 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 KLF17Q5JT82 389 aaPredicted RBP3.34□□□□□ -1.88
CD55-208ENST00000476590 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 CDC42EP5Q6NZY7 148 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 TMEM14EPQ6UXP3 125 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 PCP2Q8IVA1 136 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 EXOC3-AS1Q8N2X6 119 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 FGF14Q92915 247 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 C9orf85Q96MD7 179 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 IMUPQ9GZP8 106 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 PYGO1Q9Y3Y4 419 aa3.34□□□□□ -1.88
CD55-208ENST00000476590 KIF26BQ2KJY2 2108 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 PCDH15Q96QU1 1955 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 IGLV3-16A0A075B6K0 115 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 TRAV8-1A0A0A6YYK1 113 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 C15orf62A8K5M9 175 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ADARB2-AS1A8MUL3 147 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 MS4A18H0YCH9 400 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 J3QQQ9 107 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 SYNGR2O43760 224 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ZFAND5O76080 213 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 DPM2O94777 84 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 TRACP01848 142 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 IGHG1P01857 330 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 P04436 131 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 HLA-DRB4P13762 266 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 COX7CP15954 63 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 GCHFRP30047 84 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 PFN2P35080 140 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 RPS27P42677 84 aaKnown RBP3.33□□□□□ -1.88
CD55-208ENST00000476590 PSMB2P49721 201 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 FAM53BQ14153 422 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 CST6Q15828 149 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ZNF672Q499Z4 452 aaPredicted RBP3.33□□□□□ -1.88
CD55-208ENST00000476590 GDF5OSQ5U4N7 250 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ZNF493Q6ZR52 646 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ZAR1Q86SH2 424 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 DTX2Q86UW9 622 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 APRG1Q8IVJ8 170 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ABHD12Q8N2K0 398 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 TMEM158Q8WZ71 300 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 ODF3Q96PU9 254 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 MDFIQ99750 246 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 PLA2G2FQ9BZM2 168 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 HLA-DRB4X5D2U9 266 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 PTPRBP23467 1997 aa3.33□□□□□ -1.88
CD55-208ENST00000476590 COL4A3Q01955 1670 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 FRG2CA6NGY1 282 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 DDTLA6NHG4 134 aaPredicted RBP3.32□□□□□ -1.88
CD55-208ENST00000476590 VCYO14598 125 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 CDX4O14627 284 aaPredicted RBP3.32□□□□□ -1.88
CD55-208ENST00000476590 MPDU1O75352 247 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 NCR2O95944 276 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 PLGLB1Q02325 96 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 FXYD3Q14802 87 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 CENPWQ5EE01 88 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 MARCH3Q86UD3 253 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 OR52N5Q8NH56 324 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 CYYR1Q96J86 154 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 DEFB118Q96PH6 123 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 FAM173AQ9BQD7 235 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 EPDR1Q9UM22 224 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 U3KQE9 123 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 ARHGAP21Q5T5U3 1957 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 HOXA3O43365 443 aaPredicted RBP3.32□□□□□ -1.88
CD55-208ENST00000476590 OXTP01178 125 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 CISD3P0C7P0 127 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 FOXA3P55318 350 aaPredicted RBP3.32□□□□□ -1.88
CD55-208ENST00000476590 LOXL3P58215 753 aa3.32□□□□□ -1.88
CD55-208ENST00000476590 FAM27E3Q08E93 113 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms