RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 KRTAP10-9P60411 292 aa15.05■□□□□ 0
SYF2-204ENST00000476231 MRPL18Q9H0U6 180 aaKnown RBP15.05■□□□□ 0
SYF2-204ENST00000476231 CRYBG3Q68DQ2 2970 aa15.05■□□□□ -0
SYF2-204ENST00000476231 TRAV40A0A0B4J280 105 aa15.05■□□□□ -0
SYF2-204ENST00000476231 SMIM27A0A1W2PRY6 76 aa15.05■□□□□ -0
SYF2-204ENST00000476231 J3QKU1 62 aa15.05■□□□□ -0
SYF2-204ENST00000476231 GATCO43716 136 aaKnown RBP15.05■□□□□ -0
SYF2-204ENST00000476231 HYPMO75409 117 aa15.05■□□□□ -0
SYF2-204ENST00000476231 IBA57Q5T440 356 aaKnown RBP15.05■□□□□ -0
SYF2-204ENST00000476231 C19orf35Q6ZS72 473 aa15.05■□□□□ -0
SYF2-204ENST00000476231 ARPC1AQ92747 370 aa15.05■□□□□ -0
SYF2-204ENST00000476231 CHRDL1Q9BU40 450 aa15.05■□□□□ -0
SYF2-204ENST00000476231 WNT10AQ9GZT5 417 aa15.05■□□□□ -0
SYF2-204ENST00000476231 C7orf69Q9H7B7 122 aa15.05■□□□□ -0
SYF2-204ENST00000476231 TSTD3H0UI37 97 aa15.04■□□□□ -0
SYF2-204ENST00000476231 PYYP10082 97 aa15.04■□□□□ -0
SYF2-204ENST00000476231 Q0VG73 95 aa15.04■□□□□ -0
SYF2-204ENST00000476231 RUSC1-AS1Q66K80 236 aa15.04■□□□□ -0
SYF2-204ENST00000476231 LRRC75A-AS1Q8N1F1 130 aa15.04■□□□□ -0
SYF2-204ENST00000476231 Q8N9W7 124 aa15.04■□□□□ -0
SYF2-204ENST00000476231 NAV3Q8IVL0 2385 aa15.04■□□□□ -0
SYF2-204ENST00000476231 FAM208BQ5VWN6 2430 aa15.04■□□□□ -0
SYF2-204ENST00000476231 LRRK2Q5S007 2527 aa15.04■□□□□ -0
SYF2-204ENST00000476231 A0A096LNT2 108 aa15.04■□□□□ -0
SYF2-204ENST00000476231 PAFAH1B2P68402 229 aa15.04■□□□□ -0
SYF2-204ENST00000476231 OR8I2Q8N0Y5 310 aa15.04■□□□□ -0
SYF2-204ENST00000476231 HIF1ANQ9NWT6 349 aa15.04■□□□□ -0
SYF2-204ENST00000476231 KLF12Q9Y4X4 402 aa15.04■□□□□ -0
SYF2-204ENST00000476231 MED13LQ71F56 2210 aa15.03■□□□□ -0
SYF2-204ENST00000476231 IGHV3-48P01763 117 aa15.03■□□□□ -0
SYF2-204ENST00000476231 HLA-DRB1P01911 266 aa15.03■□□□□ -0
SYF2-204ENST00000476231 CBLN1P23435 193 aa15.03■□□□□ -0
SYF2-204ENST00000476231 TMEM183BQ1AE95 376 aa15.03■□□□□ -0
SYF2-204ENST00000476231 DEFB113Q30KQ7 82 aa15.03■□□□□ -0
SYF2-204ENST00000476231 RASL11AQ6T310 242 aa15.03■□□□□ -0
SYF2-204ENST00000476231 LINC01356Q8N9X3 169 aa15.03■□□□□ -0
SYF2-204ENST00000476231 FAM103A1Q9BTL3 118 aaKnown RBP15.03■□□□□ -0
SYF2-204ENST00000476231 RNASE7Q9H1E1 156 aaKnown RBP15.03■□□□□ -0
SYF2-204ENST00000476231 IGHV3OR16-10A0A075B7F0 116 aa15.02■□□□□ -0
SYF2-204ENST00000476231 NPIPB5A8MRT5 1133 aa15.02■□□□□ -0
SYF2-204ENST00000476231 OR1B1Q8NGR6 318 aa15.02■□□□□ -0
SYF2-204ENST00000476231 RASL11BQ9BPW5 248 aa15.02■□□□□ -0
SYF2-204ENST00000476231 MEGF9Q9H1U4 602 aa15.02■□□□□ -0
SYF2-204ENST00000476231 EPDR1Q9UM22 224 aa15.02■□□□□ -0
SYF2-204ENST00000476231 FBN2P35556 2912 aa15.02□□□□□ -0.01
SYF2-204ENST00000476231 I3L2K1 104 aa15.02□□□□□ -0.01
SYF2-204ENST00000476231 CRISP2P16562 243 aa15.02□□□□□ -0.01
SYF2-204ENST00000476231 ORM2P19652 201 aa15.02□□□□□ -0.01
SYF2-204ENST00000476231 BAGE2Q86Y30 109 aa15.02□□□□□ -0.01
SYF2-204ENST00000476231 SNURFLB1AK76 121 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 MGST1P10620 155 aaKnown RBP15.01□□□□□ -0.01
SYF2-204ENST00000476231 IER3P46695 156 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 NDPQ00604 133 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 LOXL1Q08397 574 aaPredicted RBP15.01□□□□□ -0.01
SYF2-204ENST00000476231 IQCJQ1A5X6 159 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 BRD3OSQ6XYD6 125 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 MBD6Q96DN6 1003 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 TMEM14CQ9P0S9 112 aa15.01□□□□□ -0.01
SYF2-204ENST00000476231 IGHV7-81A0A0B4J1V7 117 aa15□□□□□ -0.01
SYF2-204ENST00000476231 IZUMO1RA6ND01 250 aa15□□□□□ -0.01
SYF2-204ENST00000476231 NBEAP1P0C6P0 100 aa15□□□□□ -0.01
SYF2-204ENST00000476231 IGHV4-38-2P0DP08 117 aa15□□□□□ -0.01
SYF2-204ENST00000476231 RANP62826 216 aaKnown RBP15□□□□□ -0.01
SYF2-204ENST00000476231 ASPHD1Q5U4P2 390 aa15□□□□□ -0.01
SYF2-204ENST00000476231 LURAP1LQ8IV03 231 aa15□□□□□ -0.01
SYF2-204ENST00000476231 TMEM256Q8N2U0 113 aa15□□□□□ -0.01
SYF2-204ENST00000476231 TTC9CQ8N5M4 171 aa15□□□□□ -0.01
SYF2-204ENST00000476231 NOL4LQ96MY1 436 aaPredicted RBP15□□□□□ -0.01
SYF2-204ENST00000476231 HLA-DQA1P01909 254 aa15□□□□□ -0.01
SYF2-204ENST00000476231 IGLC1P0CG04 106 aa15□□□□□ -0.01
SYF2-204ENST00000476231 DEFA6Q01524 100 aa15□□□□□ -0.01
SYF2-204ENST00000476231 CMTM2Q8TAZ6 248 aa15□□□□□ -0.01
SYF2-204ENST00000476231 WIPF2Q8TF74 440 aaPredicted RBP15□□□□□ -0.01
SYF2-204ENST00000476231 GRAMD2BQ96HH9 432 aa15□□□□□ -0.01
SYF2-204ENST00000476231 SPG11Q96JI7 2443 aa15□□□□□ -0.01
SYF2-204ENST00000476231 VPS13CQ709C8 3753 aa14.99□□□□□ -0.01
SYF2-204ENST00000476231 ZNF705GA8MUZ8 300 aaPredicted RBP14.99□□□□□ -0.01
SYF2-204ENST00000476231 AMY1AP04745 511 aa14.99□□□□□ -0.01
SYF2-204ENST00000476231 GP9P14770 177 aa14.99□□□□□ -0.01
SYF2-204ENST00000476231 TMEM136Q6ZRR5 245 aa14.99□□□□□ -0.01
SYF2-204ENST00000476231 RBM14Q96PK6 669 aaKnown RBP14.99□□□□□ -0.01
SYF2-204ENST00000476231 HIGD1AQ9Y241 93 aa14.99□□□□□ -0.01
SYF2-204ENST00000476231 IGHV3-21A0A0B4J1V1 117 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 TPPP2P59282 170 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 C9orf152Q5JTZ5 239 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 FAM209BQ5JX69 171 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 C5orf17Q8NAS9 161 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 TP53TG3Q9ULZ0 132 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 J3QLI3 93 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 K7EIM0 57 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 EGR2P11161 476 aaPredicted RBP14.98□□□□□ -0.01
SYF2-204ENST00000476231 DDTP30046 118 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 RAB4BP61018 213 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 OR10J3Q5JRS4 329 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 ATG101Q9BSB4 218 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 RNF24Q9Y225 148 aa14.98□□□□□ -0.01
SYF2-204ENST00000476231 PGPA6NDG6 321 aa14.97□□□□□ -0.01
SYF2-204ENST00000476231 SLC25A5P05141 298 aaKnown RBP14.97□□□□□ -0.01
SYF2-204ENST00000476231 UBE2G1P62253 170 aa14.97□□□□□ -0.01
SYF2-204ENST00000476231 PIFOQ8TCI5 191 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms