RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CKS1BP61024 79 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 SLC38A11Q08AI6 406 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 SS18Q15532 418 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 SMIM21Q3B7S5 101 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 MORN2Q502X0 79 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 Q5XG85 94 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 LCN15Q6UWW0 184 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 PDZD9Q8IXQ8 264 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 PPTC7Q8NI37 304 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 ZC2HC1AQ96GY0 325 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 GINS4Q9BRT9 223 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 PRADC1Q9BSG0 188 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 OR2H1Q9GZK4 316 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 NDUFB11Q9NX14 153 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 NAT8BQ9UHF3 227 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 BAIAP2Q9UQB8 552 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 MED23Q9ULK4 1368 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 SMARCA4P51532 1647 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 SBF1O95248 1867 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 CEP164Q9UPV0 1460 aa2.2□□□□□ -2.06
TM9SF3-204ENST00000475401 VIRMAQ69YN4 1812 aaKnown RBP2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 PIK3C2AO00443 1686 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 KDM5BQ9UGL1 1544 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 TMEM189A5PLL7 270 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 CTSDP07339 412 aaPredicted RBP2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 RHOGP84095 191 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 MSMO1Q15800 293 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 NNATQ16517 81 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 KHDC3LQ587J8 217 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 PATE2Q6UY27 113 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 OR2T10Q8NGZ9 312 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 FAM107BQ9H098 131 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 TRAPPC2LQ9UL33 140 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 ANKRD31Q8N7Z5 1873 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 NUP98P52948 1817 aa2.19□□□□□ -2.06
TM9SF3-204ENST00000475401 OTOGLQ3ZCN5 2332 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 IGHV1-58A0A0C4DH39 117 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 ODAMA1E959 279 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 EFCAB10A6NFE3 127 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 LY6LH3BQJ8 138 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 J3QQQ9 107 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 NDUFB3O43676 98 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 CST7O76096 145 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 TNFSF15O95150 251 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 METTL15P1P0C7V9 234 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 CRYGAP11844 174 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 ARPP19P56211 112 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 DYNLT1P63172 113 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 HBBP68871 147 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 DPPA3Q6W0C5 159 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 OR8J3Q8NGG0 315 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 LZICQ8WZA0 190 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 AQP3Q92482 292 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 ADAT1Q9BUB4 502 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 NPCDR1Q9BY65 106 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 TMEM106BQ9NUM4 274 aa2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 NHP2Q9NX24 153 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-204ENST00000475401 OVOS2A0A0G2JMS6 1433 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 CACNA1GO43497 2377 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 TMSB15BA0A087X1C1 80 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 TMBIM6P55061 237 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 NDUFA5Q16718 116 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 BRMS1LQ5PSV4 323 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 SOSTDC1Q6X4U4 206 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 ZNF826PQ6ZT77 177 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 Q6ZTI0 123 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 CROCCP2Q86T23 111 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 C9orf163Q8N9P6 203 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 MRPS24Q96EL2 167 aaKnown RBP2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 TCEAL2Q9H3H9 227 aaPredicted RBP2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 TPT1P8Q9HAU6 139 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 HS3ST2Q9Y278 367 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 LTBP2Q14767 1821 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 NISCHQ9Y2I1 1504 aa2.17□□□□□ -2.06
TM9SF3-204ENST00000475401 N4BP2Q86UW6 1770 aaPredicted RBP2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 ADAMTS7Q9UKP4 1686 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 RFPL4AA6NLU0 287 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 C9JAW5 83 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 RFPL4AL1F8VTS6 287 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 SDCBPO00560 298 aaPredicted RBP2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 LYZL6O75951 148 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 MPC1LP0DKB6 136 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 PEBP1P30086 187 aaKnown RBP2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 SDC4P31431 198 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 RPL35P42766 123 aaKnown RBP2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 CCDC58Q4VC31 144 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 AAED1Q7RTV5 226 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 SLC30A7Q8NEW0 376 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 OR4E2Q8NGC2 313 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 LXNQ9BS40 222 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 HSPB8Q9UJY1 196 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 HIGD1AQ9Y241 93 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 TAF1LQ8IZX4 1826 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 PTPRBP23467 1997 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 MYH10P35580 1976 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 FER1L6Q2WGJ9 1857 aa2.16□□□□□ -2.06
TM9SF3-204ENST00000475401 BICRAQ9NZM4 1560 aa2.15□□□□□ -2.06
TM9SF3-204ENST00000475401 A2MP01023 1474 aa2.15□□□□□ -2.06
TM9SF3-204ENST00000475401 LOC107984640A0A0U1RRK4 108 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms