RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CLDN34H7C241 214 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 APOC3P02656 99 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 CD99P14209 185 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 RAB9AP51151 201 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 UBE2G2P60604 165 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 UBE2L3P68036 154 aaKnown RBP10.65□□□□□ -0.7
TRAF4-210ENST00000475329 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-210ENST00000475329 ZNF329Q86UD4 541 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 ZNF418Q8TF45 676 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-210ENST00000475329 TXNDC17Q9BRA2 123 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 PAXXQ9BUH6 204 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
TRAF4-210ENST00000475329 KLK15Q9H2R5 256 aa10.65□□□□□ -0.7
TRAF4-210ENST00000475329 PUS1Q9Y606 427 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAF4-210ENST00000475329 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
TRAF4-210ENST00000475329 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 H3BRN7 92 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 BMPR1BO00238 502 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 PSMB8P28062 276 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 S100A7P31151 101 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 CD81P60033 236 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 FOXE3Q13461 319 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 USF2Q15853 346 aaPredicted RBP10.64□□□□□ -0.71
TRAF4-210ENST00000475329 FAM209BQ5JX69 171 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 CYB561D1Q8N8Q1 229 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 SUN5Q8TC36 379 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 OR51M1Q9H341 326 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 ESM1Q9NQ30 184 aa10.64□□□□□ -0.71
TRAF4-210ENST00000475329 ZNF469Q96JG9 3925 aaPredicted RBP10.64□□□□□ -0.71
TRAF4-210ENST00000475329 SONP18583 2426 aaKnown RBP10.64□□□□□ -0.71
TRAF4-210ENST00000475329 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 FAM74A7A6NL05 159 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 RNASE1P07998 156 aaKnown RBP10.63□□□□□ -0.71
TRAF4-210ENST00000475329 ELANEP08246 267 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 OR10J4P0C629 311 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 PYYP10082 97 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 ARL3P36405 182 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 ATP5G3P48201 142 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 CEBPGP53567 150 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
TRAF4-210ENST00000475329 SOHLH1Q5JUK2 328 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 ZNF343Q6P1L6 599 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 TEX38Q6PEX7 206 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 LCNL1Q6ZST4 164 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 CCDC28AQ8IWP9 274 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 OR4F5Q8NH21 305 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 OR4F4Q96R69 305 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 SERTAD4Q9NUC0 356 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 RABAC1Q9UI14 185 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 RNF24Q9Y225 148 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 YTHDF2Q9Y5A9 579 aaKnown RBP10.63□□□□□ -0.71
TRAF4-210ENST00000475329 SVEP1Q4LDE5 3571 aa10.63□□□□□ -0.71
TRAF4-210ENST00000475329 PPP5D1E7EU14 171 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 F6UZH7 168 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 TMEM250H0YL14 139 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 PDE6DO43924 150 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 IGHV3-11P01762 117 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 GP9P14770 177 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 TOMM20LQ6UXN7 152 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 SVBPQ8N300 66 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 FXYD5Q96DB9 178 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 ZNF414Q96IQ9 312 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 ZFAND3Q9H8U3 227 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 TMEM14CQ9P0S9 112 aa10.62□□□□□ -0.71
TRAF4-210ENST00000475329 IGHV3-35A0A0C4DH35 117 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 A0A1W2PRE2 83 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 CRYBA1P05813 215 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 HILS1P60008 231 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 KIAA0141Q14154 515 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-210ENST00000475329 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 FAM90A2PQ658T7 463 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 C10orf99Q6UWK7 81 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 Q6ZSV7 163 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
TRAF4-210ENST00000475329 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
TRAF4-210ENST00000475329 SNAPINO95295 136 aa10.6□□□□□ -0.71
TRAF4-210ENST00000475329 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
TRAF4-210ENST00000475329 BPIFA4PQ86YQ2 179 aa10.6□□□□□ -0.71
TRAF4-210ENST00000475329 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
TRAF4-210ENST00000475329 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
TRAF4-210ENST00000475329 OTOGQ6ZRI0 2925 aa10.59□□□□□ -0.71
TRAF4-210ENST00000475329 NDUFA4O00483 81 aa10.59□□□□□ -0.71
TRAF4-210ENST00000475329 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
TRAF4-210ENST00000475329 HIST1H1EP10412 219 aaKnown RBP10.59□□□□□ -0.71
TRAF4-210ENST00000475329 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
TRAF4-210ENST00000475329 METTL26Q96S19 204 aa10.59□□□□□ -0.71
TRAF4-210ENST00000475329 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-210ENST00000475329 PEF1Q9UBV8 284 aaKnown RBP10.59□□□□□ -0.71
TRAF4-210ENST00000475329 HIVEP2P31629 2446 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 ZFHX3Q15911 3703 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 GGTLC3B5MD39 225 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
TRAF4-210ENST00000475329 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
TRAF4-210ENST00000475329 NBEAP1P0C6P0 100 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms