RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 IGFL4Q6B9Z1 124 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 RCHY1Q96PM5 261 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 KLHDC3Q9BQ90 382 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 SLC25A39Q9BZJ4 359 aaPredicted RBP9.03□□□□□ -0.96
VAPB-204ENST00000475243 FCN3O75636 299 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 HBDP02042 147 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
VAPB-204ENST00000475243 SLC25A15Q9Y619 301 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 RFNGQ9Y644 331 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 TSC2P49815 1807 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 IGHV1-3A0A0C4DH29 117 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 IGLV3-32A0A0A0MS00 114 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 PCP4P48539 62 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 Q0VFX4 171 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 LCNL1Q6ZST4 164 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 PRDM13Q9H4Q3 707 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 J3QRE1 110 aa9.02□□□□□ -0.96
VAPB-204ENST00000475243 ANAPC1Q9H1A4 1944 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 C5orf63A6NC05 138 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 IL18BPO95998 194 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 TNCP24821 2201 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 S100A7L2Q5SY68 101 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 CD177Q8N6Q3 437 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 MAPK1IP1LQ8NDC0 245 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
VAPB-204ENST00000475243 A0A087WX48 190 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 HOXA3O43365 443 aaPredicted RBP9.02□□□□□ -0.97
VAPB-204ENST00000475243 TIMP3P35625 211 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 MEGF9Q9H1U4 602 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 KLHL30-AS1Q8NEE0 82 aa9.02□□□□□ -0.97
VAPB-204ENST00000475243 RPUSD1Q9UJJ7 312 aaKnown RBP9.02□□□□□ -0.97
VAPB-204ENST00000475243 TRGV11A0A075B6L2 103 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
VAPB-204ENST00000475243 IGKCP01834 107 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
VAPB-204ENST00000475243 NCKAP5O14513 1909 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 ASCL4Q6XD76 172 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 DTX2Q86UW9 622 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 MGST2Q99735 147 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 MST1P26927 711 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 TPTE2P1Q5T6R2 138 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 TREML4Q6UXN2 200 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 A0A1W2PRE2 83 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 GGTLC1Q9BX51 225 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 OSTCQ9NRP0 149 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 CLDN16Q9Y5I7 305 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 F2Z2F3 143 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 EFNA4P52798 201 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 Q8TAT8 98 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 PRADC1Q9BSG0 188 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 CRYGSP22914 178 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 NABP1Q96AH0 204 aa9.01□□□□□ -0.97
VAPB-204ENST00000475243 GATD1Q8NB37 220 aa9□□□□□ -0.97
VAPB-204ENST00000475243 SRRM5B3KS81 715 aa9□□□□□ -0.97
VAPB-204ENST00000475243 TCRAP04437 139 aa9□□□□□ -0.97
VAPB-204ENST00000475243 PLNP26678 52 aa9□□□□□ -0.97
VAPB-204ENST00000475243 ID3Q02535 119 aa9□□□□□ -0.97
VAPB-204ENST00000475243 ZNF876PQ49A33 203 aa9□□□□□ -0.97
VAPB-204ENST00000475243 OVOL1O14753 267 aa9□□□□□ -0.97
VAPB-204ENST00000475243 LYPD2Q6UXB3 125 aa9□□□□□ -0.97
VAPB-204ENST00000475243 IFI27L1Q96BM0 104 aa9□□□□□ -0.97
VAPB-204ENST00000475243 LAMTOR2Q9Y2Q5 125 aa9□□□□□ -0.97
VAPB-204ENST00000475243 KIF26AQ9ULI4 1882 aaPredicted RBP9□□□□□ -0.97
VAPB-204ENST00000475243 LAGE3Q14657 143 aa9□□□□□ -0.97
VAPB-204ENST00000475243 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
VAPB-204ENST00000475243 RNF144BQ7Z419 303 aa9□□□□□ -0.97
VAPB-204ENST00000475243 STAG3L3P0CL85 134 aa9□□□□□ -0.97
VAPB-204ENST00000475243 HGFACQ04756 655 aa9□□□□□ -0.97
VAPB-204ENST00000475243 NEUROG3Q9Y4Z2 214 aa9□□□□□ -0.97
VAPB-204ENST00000475243 COL8A2P25067 703 aa9□□□□□ -0.97
VAPB-204ENST00000475243 OR2K2Q8NGT1 345 aa9□□□□□ -0.97
VAPB-204ENST00000475243 GNB1LQ9BYB4 327 aa9□□□□□ -0.97
VAPB-204ENST00000475243 D6R8Y8 96 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 FAM166AQ6J272 317 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 COL4A6Q14031 1691 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 ZSWIM8A7E2V4 1837 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 PSCAO43653 123 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 ZNF581Q9P0T4 197 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HEPN1Q6WQI6 88 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 SLC25A48Q6ZT89 311 aaKnown RBP8.99□□□□□ -0.97
VAPB-204ENST00000475243 TMEM86BQ8N661 226 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 TSKUQ8WUA8 353 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 TRAV8-1A0A0A6YYK1 113 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BKO60814 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BJP06899 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BOP23527 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BBP33778 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BDP58876 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BCP62807 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST2H2BEQ16778 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BHQ93079 126 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms