RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
USP54-211ENST00000474929 SLAQ13239 276 aa5.31□□□□□ -1.56
USP54-211ENST00000474929 ARL6IP1Q15041 203 aa5.31□□□□□ -1.56
USP54-211ENST00000474929 HACD4Q5VWC8 232 aa5.31□□□□□ -1.56
USP54-211ENST00000474929 RNASE8Q8TDE3 154 aaKnown RBP5.31□□□□□ -1.56
USP54-211ENST00000474929 Q8WTZ3 238 aa5.31□□□□□ -1.56
USP54-211ENST00000474929 NUDCD2Q8WVJ2 157 aa5.31□□□□□ -1.56
USP54-211ENST00000474929 NAA50Q9GZZ1 169 aaKnown RBP5.31□□□□□ -1.56
USP54-211ENST00000474929 RCL1Q9Y2P8 373 aaKnown RBP5.31□□□□□ -1.56
USP54-211ENST00000474929 A0A0D9SG52 128 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 SNURFLB1AK76 121 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 SSX5O60225 188 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 DTYMKP23919 212 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 TMBIM6P55061 237 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 MRPL23Q16540 153 aaKnown RBP5.3□□□□□ -1.56
USP54-211ENST00000474929 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 GPR107Q5VW38 600 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 AMTNQ6UX39 209 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 NEGR1Q7Z3B1 354 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 CCDC28AQ8IWP9 274 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 SLC24A4Q8NFF2 622 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 OR52E5Q8NH55 327 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 SLC25A38Q96DW6 304 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 S100A16Q96FQ6 103 aaKnown RBP5.3□□□□□ -1.56
USP54-211ENST00000474929 VSIG2Q96IQ7 327 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 LINC01600Q96MT4 127 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 LINC01587Q99440 93 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 DIABLOQ9NR28 239 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 COMMD3Q9UBI1 195 aa5.3□□□□□ -1.56
USP54-211ENST00000474929 GAGE12BA1L429 117 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 MEIS3P1A6NDR6 274 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 BUB3O43684 328 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 GAGE7O76087 117 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 IGHV3-48P01763 117 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 GAGE12FP0CL80 117 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 GAGE12GP0CL81 117 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 GAGE12IP0CL82 117 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 ZNF182P17025 639 aaPredicted RBP5.29□□□□□ -1.56
USP54-211ENST00000474929 AZU1P20160 251 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 NFYAP23511 347 aaPredicted RBP5.29□□□□□ -1.56
USP54-211ENST00000474929 TNFSF8P32971 234 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 SNCAP37840 140 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 SUB1P53999 127 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP54-211ENST00000474929 LAGE3Q14657 143 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 SPINK13Q1W4C9 94 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 LYPD5Q6UWN5 251 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 SAMD12Q8N8I0 201 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 OR6F1Q8NGZ6 308 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 OR4X1Q8NH49 305 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 RAB2BQ8WUD1 216 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 C20orf144Q9BQM9 153 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 AUNIPQ9H7T9 357 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 KLK11Q9UBX7 282 aa5.29□□□□□ -1.56
USP54-211ENST00000474929 IGKV1D-13A0A0B4J2D9 117 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 RBFOX3A6NFN3 312 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 IBA57-AS1B1ANH7 110 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 BOLA2-SMG1P6H3BVE0 249 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 H7BYZ3 331 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 PANO1I0J062 215 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 M0R2Z0 102 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 CRXO43186 299 aaPredicted RBP5.28□□□□□ -1.56
USP54-211ENST00000474929 PAX4O43316 350 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 TNFSF12O43508 249 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 NOL3O60936 208 aaKnown RBP5.28□□□□□ -1.56
USP54-211ENST00000474929 SCGNO76038 276 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 IGKV1-13P0DP09 117 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 GAMTQ14353 236 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 CNIH2Q6PI25 160 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 BAP18Q8IXM2 172 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 ZBTB8BQ8NAP8 495 aaPredicted RBP5.28□□□□□ -1.56
USP54-211ENST00000474929 OR11H7Q8NGC8 314 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 OR1S2Q8NGQ3 325 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 TMPRSS5Q9H3S3 457 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 ANXA10Q9UJ72 324 aa5.28□□□□□ -1.56
USP54-211ENST00000474929 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.27□□□□□ -1.57
USP54-211ENST00000474929 TRGV2A0A075B6R0 118 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 A0A0A6YYH2 397 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 A6NJ64 397 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 SULT1C2O00338 296 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 SOCS3O14543 225 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 HPGDSO60760 199 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 IL4P05112 153 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 HTN1P15515 57 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 ELK1P19419 428 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 FCGR2CP31995 323 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 OPRK1P41145 380 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 SCAND1P57086 179 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 DEFB1P60022 68 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 YPEL3P61236 119 aaPredicted RBP5.27□□□□□ -1.57
USP54-211ENST00000474929 DHODHQ02127 395 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 ZNF415Q09FC8 603 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 CTF1Q16619 201 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 UBE2NLQ5JXB2 153 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 C1orf194Q5T5A4 169 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 AADACL3Q5VUY0 350 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 OR8G2PQ6IF36 304 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 HOGA1Q86XE5 327 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 WFDC10BQ8IUB3 73 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 SNX29P2Q8IUI4 249 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms