RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CCL4P13236 92 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 HTR1DP28221 377 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 MYCNOSP40205 109 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 PLP1P60201 277 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 RPL8P62917 257 aaKnown RBP6.52□□□□□ -1.37
CCDC93-208ENST00000474546 EDDM3AQ14507 147 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 PSG3Q16557 428 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 RNF151Q2KHN1 245 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 VMA21Q3ZAQ7 101 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 TMEM177Q53S58 311 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 MPV17L2Q567V2 206 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 LDLRAD2Q5SZI1 272 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 SPATA31B1PQ5VZV4 182 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 SPINK14Q6IE38 97 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 ZCCHC24Q8N2G6 241 aaKnown RBP6.52□□□□□ -1.37
CCDC93-208ENST00000474546 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 RPRMLQ8N4K4 120 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 MDS2Q8NDY4 140 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 OR5AN1Q8NGI8 311 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 OR4C13Q8NGP0 309 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 TMEM167AQ8TBQ9 72 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 FAM167A-AS1Q96KT0 104 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 SRSF8Q9BRL6 282 aaKnown RBP6.52□□□□□ -1.37
CCDC93-208ENST00000474546 MLST8Q9BVC4 326 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 AKIRIN1Q9H9L7 192 aaPredicted RBP6.52□□□□□ -1.37
CCDC93-208ENST00000474546 OTORQ9NRC9 128 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 PLSCR4Q9NRQ2 329 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 NDUFA4L2Q9NRX3 87 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 DCHS2Q6V1P9 2916 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 DOCK11Q5JSL3 2073 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 TGP01266 2768 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 IGHV1-24A0A0C4DH33 117 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 A0A1B0GUT8 65 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 PSMB11A5LHX3 300 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 PINLYPA6NC86 204 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 C19orf71A6NCJ1 209 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 C9orf118A6NHY6 69 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 IGHV3-13P01766 116 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 SLC25A5P05141 298 aaKnown RBP6.51□□□□□ -1.37
CCDC93-208ENST00000474546 THBDP07204 575 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 DEFA4P12838 97 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 HLA-DRB4P13762 266 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 LGALS7P47929 136 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 LGALS9BQ3B8N2 356 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 TMEM97Q5BJF2 176 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 LGALS9CQ6DKI2 356 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 RFESDQ8TAC1 157 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 UBALD1Q8TB05 177 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 Q8TCH9 128 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 TMEM186Q96B77 213 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 SARAFQ96BY9 339 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF503Q96F45 646 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 HINT2Q9BX68 163 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 C12orf49Q9H741 205 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 SMPXQ9UHP9 88 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 RABAC1Q9UI14 185 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 RPUSD1Q9UJJ7 312 aaKnown RBP6.51□□□□□ -1.37
CCDC93-208ENST00000474546 LINC00312Q9Y6C7 94 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 HLA-DRB4X5D2U9 266 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 KNL1Q8NG31 2342 aa6.51□□□□□ -1.37
CCDC93-208ENST00000474546 ARHGAP21Q5T5U3 1957 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 IGHV3-43A0A0B4J1X8 118 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 SRRM4A7MD48 611 aaKnown RBP6.5□□□□□ -1.37
CCDC93-208ENST00000474546 DEFB108AA8MXU0 73 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 SPINK4O60575 86 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 PROP1O75360 226 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 IGHG3P01860 377 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 IGLC1P0CG04 106 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 IGHV3-43DP0DP04 118 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 IGHV1-2P23083 117 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 CEACAM8P31997 349 aaPredicted RBP6.5□□□□□ -1.37
CCDC93-208ENST00000474546 CEBPDP49716 269 aaPredicted RBP6.5□□□□□ -1.37
CCDC93-208ENST00000474546 CAMPP49913 170 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 RPS16P62249 146 aaKnown RBP6.5□□□□□ -1.37
CCDC93-208ENST00000474546 RPL39P5Q59GN2 51 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 ZNF833PQ6ZTB9 187 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 PRIMA1Q86XR5 153 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 CIARTQ8N365 385 aaPredicted RBP6.5□□□□□ -1.37
CCDC93-208ENST00000474546 LINC00311Q8N616 119 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 CD177Q8N6Q3 437 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 TNFRSF14Q92956 283 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 FLYWCH2Q96CP2 140 aaKnown RBP6.5□□□□□ -1.37
CCDC93-208ENST00000474546 FXYD5Q96DB9 178 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 JKAMPQ9P055 326 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 RNF7Q9UBF6 113 aa6.5□□□□□ -1.37
CCDC93-208ENST00000474546 TLN2Q9Y4G6 2542 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 GTF3C1Q12789 2109 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 IGKV1D-17A0A075B6S4 117 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 AHRRA9YTQ3 701 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 C9orf172C9J069 976 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 K7EP34 96 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 WNT9BO14905 357 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 LHBP01229 141 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 TCRAP04437 139 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 NBEAP1P0C6P0 100 aa6.49□□□□□ -1.37
CCDC93-208ENST00000474546 FABP2P12104 132 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms