RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 UQCC1Q9NVA1 299 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 UBAP1Q9NZ09 502 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 HSPB8Q9UJY1 196 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 OR52A1Q9UKL2 312 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 HECW1Q76N89 1606 aa0.48□□□□□ -2.33
ECHDC1-213ENST00000474240 TRAV10A0A0B4J240 114 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 CD2P06729 351 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 UBE2BP63146 152 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 AKIRIN2Q53H80 203 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 SPINK9Q5DT21 86 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 EIF5AL1Q6IS14 154 aaKnown RBP0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 OR11H6Q8NGC7 330 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 MUCL1Q96DR8 90 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 PCTPQ9UKL6 214 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 RNF11Q9Y3C5 154 aa0.47□□□□□ -2.33
ECHDC1-213ENST00000474240 MCM3APO60318 1980 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 KIF1BO60333 1816 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 CNTRLQ7Z7A1 2325 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 TRBV19A0A075B6N1 114 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 A0A087WUJ7 227 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 SMIM9A6NGZ8 99 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 TMEM114B3SHH9 223 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 KLF7O75840 302 aaPredicted RBP0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 COX7CP15954 63 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 KDELR1P24390 212 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 VBP1P61758 197 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 CDK6Q00534 326 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 RRN3P1Q2M238 152 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 PDZD9Q8IXQ8 264 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 OR10K1Q8NGX5 313 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 ADAT3Q96EY9 351 aaPredicted RBP0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 SIGMAR1Q99720 223 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 PRRT1Q99946 306 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 TCEAL2Q9H3H9 227 aaPredicted RBP0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 ARL2BPQ9Y2Y0 163 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 FAM32AQ9Y421 112 aaKnown RBP0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 KCPQ6ZWJ8 1503 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 SCN3AQ9NY46 2000 aa0.46□□□□□ -2.34
ECHDC1-213ENST00000474240 ARHGEF11O15085 1522 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 PLXND1Q9Y4D7 1925 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 M0R233 179 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 OR7C1O76099 320 aaPredicted RBP0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 OR10J4P0C629 311 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 CXCL8P10145 99 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 CDKN2CP42773 168 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 DSCR4P56555 118 aaPredicted RBP0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 DEFA3P59666 94 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 Q6ZS92 163 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 EXOC3-AS1Q8N2X6 119 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 PSTPIP2Q9H939 334 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 SLC22A13Q9Y226 551 aa0.45□□□□□ -2.34
ECHDC1-213ENST00000474240 ZNF106Q9H2Y7 1883 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 COL1A1P02452 1464 aaPredicted RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 PLB1Q6P1J6 1458 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 DOCK3Q8IZD9 2030 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 HMGB3O15347 200 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 HOXA6P31267 233 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 SPATA45Q537H7 98 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 ZNF833PQ6ZTB9 187 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 C12orf45Q8N5I9 185 aaPredicted RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 OR8J2Q8NGG1 315 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 RNASE7Q9H1E1 156 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 TMEM133Q9H2Q1 129 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 C10orf95Q9H7T3 257 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 PARVBQ9HBI1 364 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 ENY2Q9NPA8 101 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 CHCHD2Q9Y6H1 151 aaPredicted RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 ARHGEF28Q8N1W1 1705 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
ECHDC1-213ENST00000474240 TRAV4A0A0B4J268 109 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 E7EUB6 86 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 BANF1O75531 89 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 HAND1O96004 215 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 SERPINA1P01009 418 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 TCRBP04435 133 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 IFNA4P05014 189 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 RNASE4P34096 147 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 OR5AS1Q8N127 324 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 OR10AG1Q8NH19 301 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 ZNF714Q96N38 554 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 LYSMD1Q96S90 227 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 NPCDR1Q9BY65 106 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 OPTCQ9UBM4 332 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 OBSL1O75147 1896 aa0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 SNRNP200O75643 2136 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-213ENST00000474240 JMJD7-PLA2G4BH0Y9G9 81 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 AIPO00170 330 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 TAX1BP3O14907 124 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 PPYP01298 95 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 HLA-EP13747 358 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 RAB5CP51148 216 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 CCL7P80098 99 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 KRTAP26-1Q6PEX3 210 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 OR5D16Q8NGK9 328 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 OR10X1Q8NGY0 326 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 TSKUQ8WUA8 353 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 RAB37Q96AX2 223 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 TEX37Q96LM6 180 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 PHB2Q99623 299 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms