RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 LINC01590Q5TEZ4 76 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 OR4C11Q6IEV9 310 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 ZNF841Q6ZN19 808 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 LYZL2Q7Z4W2 148 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 MYOZ3Q8TDC0 251 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 BAALCQ8WXS3 180 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 PLEKHB2Q96CS7 222 aa5.88□□□□□ -1.47
GPNMB-209ENST00000474157 CHCHD2Q9Y6H1 151 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-209ENST00000474157 ABCA7Q8IZY2 2146 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 IGLV3-10A0A075B6K4 115 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 C17orf51A8MQB3 221 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 SPRY1O43609 319 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 CHST1O43916 411 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 ATP5LO75964 103 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 CRYGAP11844 174 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 ZNF136P52737 540 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 RPL30P62888 115 aaKnown RBP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 HERVK_113P63121 156 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 MRPS21P82921 87 aaKnown RBP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 MZT1Q08AG7 82 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 LGALS9BQ3B8N2 356 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 LGALS9CQ6DKI2 356 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 DGAT2L7PQ6IED9 249 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 KRTAP1-3Q8IUG1 177 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 C10orf126Q8N4M7 172 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 GATD1Q8NB37 220 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 OCC1Q8TAD7 63 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 LRRC29Q8WV35 223 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 RNF138Q8WVD3 245 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 TAF15Q92804 592 aaKnown RBP eCLIP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 ZNF501Q96CX3 271 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 SLC25A2Q9BXI2 301 aa5.87□□□□□ -1.47
GPNMB-209ENST00000474157 TECRQ9NZ01 308 aaKnown RBP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 FOXA2Q9Y261 457 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-209ENST00000474157 DOCK4Q8N1I0 1966 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 TRBV7-7A0A0K0K1E9 115 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 C3orf85A0A1B0GTC6 90 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 FAM90A20PA6NIJ5 464 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 A8MWV9 139 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 K7EQS6 105 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 PAGE4O60829 102 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 NDUFS7O75251 213 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 LYPD3O95274 346 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 IFI6P09912 130 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 CECR9P0C854 216 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 CSN1S1P47710 185 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 GNB1P62873 340 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 GUSBP1Q15486 140 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 WDR38Q5JTN6 314 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 HSD11B1LQ7Z5J1 315 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 RPP25LQ8N5L8 163 aaKnown RBP5.86□□□□□ -1.47
GPNMB-209ENST00000474157 ZNF525Q8N782 197 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 ST6GALNAC6Q969X2 333 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 TMEM222Q9H0R3 208 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 KCNK15Q9H427 330 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 C21orf62Q9NYP8 219 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 IL36RNQ9UBH0 155 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 TP53TG1Q9Y2A0 90 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 V9GYV3 84 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 PLXNB3Q9ULL4 1909 aa5.86□□□□□ -1.47
GPNMB-209ENST00000474157 KIAA1549LQ6ZVL6 1849 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 MGAQ8IWI9 3026 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 C2CD3Q4AC94 2353 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 DOPEY2Q9Y3R5 2298 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 GON4LQ3T8J9 2241 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 FAM240AA0A1B0GVK7 77 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-209ENST00000474157 LOC107986453A0A1B0GWG9 222 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 KLK10O43240 276 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 PDCD6O75340 191 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 NDUFB4O95168 129 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 RENP00797 406 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 TMEM50BP56557 158 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 CLDN17P56750 224 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 RBM11P57052 281 aaKnown RBP5.85□□□□□ -1.47
GPNMB-209ENST00000474157 HERV-K104P61576 105 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 CFHR3Q02985 330 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 GOLT1AQ6ZVE7 132 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 CEND1Q8N111 149 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 TMEM116Q8NCL8 245 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 GJC3Q8NFK1 279 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 NAA38Q9BRA0 125 aaKnown RBP5.85□□□□□ -1.47
GPNMB-209ENST00000474157 TMEM147Q9BVK8 224 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 PBOV1Q9GZY1 135 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 TAS2R4Q9NYW5 299 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 FZR1Q9UM11 496 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 B9D1Q9UPM9 204 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 NCKAP5O14513 1909 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 ATMQ13315 3056 aa5.85□□□□□ -1.47
GPNMB-209ENST00000474157 NUP214P35658 2090 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-209ENST00000474157 CPAMD8Q8IZJ3 1885 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 LOC102723996A0A087X1L8 192 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 IGHV1OR15-9A0A0B4J2B8 117 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 NDUFC2-KCTD14E9PQ53 114 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 MS4A18H0YCH9 400 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 CST7O76096 145 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms