RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	OR51B2	Q9Y5P1	312 aa		4.07	□□□□□ -1.76
FN1-219	ENST00000474036	LINC00312	Q9Y6C7	94 aa		4.07	□□□□□ -1.76
FN1-219	ENST00000474036		U3KQK5	164 aa		4.07	□□□□□ -1.76
FN1-219	ENST00000474036	DNAH3	Q8TD57	4116 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	KIAA2026	Q5HYC2	2103 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	UPK2	O00526	184 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	DVL1	O14640	695 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CYB5B	O43169	146 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	FCN3	O75636	299 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	YIF1A	O95070	293 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	NDUFA7	O95182	113 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CA2	P00918	260 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	HRAS	P01112	189 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	MB	P02144	154 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	APOA2	P02652	100 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	MT-ND4L	P03901	98 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CT45A6	P0DMU7	189 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CT45A5	P0DMU8	189 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CT45A7	P0DMV0	189 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	FOLR2	P14207	255 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	NPY1R	P25929	384 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CD1B	P29016	333 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CDC34	P49427	236 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	PSMB3	P49720	205 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	KRTAP10-5	P60370	271 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	UBE2G2	P60604	165 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	ERVFC1-1	P60608	527 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	HSPE1	P61604	102 aa	Known RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	RPL36A	P83881	106 aa	Known RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	PRB3	Q04118	309 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	MEF2C	Q06413	473 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	ADIRF	Q15847	76 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	VWC2	Q2TAL6	325 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	TMEM30B	Q3MIR4	351 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	AARD	Q4LEZ3	155 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	LRRC10	Q5BKY1	277 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	ZFAND6	Q6FIF0	208 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	ZNF343	Q6P1L6	599 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	SLC25A48	Q6ZT89	311 aa	Known RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	SLC35E3	Q7Z769	313 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	ZNF329	Q86UD4	541 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	OR52E5	Q8NH55	327 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	SSMEM1	Q8WWF3	244 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CORO2A	Q92828	525 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	RPUSD4	Q96CM3	377 aa	Known RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	ZNF714	Q96N38	554 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	OR4F4	Q96R69	305 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	MGST2	Q99735	147 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	PATZ1	Q9HBE1	687 aa	Known RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	CTSZ	Q9UBR2	303 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	PRND	Q9UKY0	176 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	GAB2	Q9UQC2	676 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	PRELID1	Q9Y255	219 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	FOXA2	Q9Y261	457 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-219	ENST00000474036	URGCP-MRPS24	S4R325	110 aa		4.06	□□□□□ -1.76
FN1-219	ENST00000474036	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	IGHV1-69-2	A0A0G2JMI3	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SRRM4	A7MD48	611 aa	Known RBP	4.05	□□□□□ -1.76
FN1-219	ENST00000474036	PRSS46	E5RG02	174 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	VCY	O14598	125 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SOX15	O60248	233 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GAGE7	O76087	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	KBTBD11	O94819	623 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	IGKV1-16	P04430	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GAGE12F	P0CL80	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GAGE12G	P0CL81	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GAGE12I	P0CL82	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SAA1	P0DJI8	122 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-219	ENST00000474036	IGLL1	P15814	213 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	PAX6	P26367	422 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	RPS10	P46783	165 aa	Known RBP	4.05	□□□□□ -1.76
FN1-219	ENST00000474036	CD81	P60033	236 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SNRPE	P62304	92 aa	Known RBP	4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GAGE1	Q13065	139 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GAGE4	Q13068	117 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	DIAPH2-AS1	Q14236	149 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SPATA31B1P	Q5VZV4	182 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	ZNF833P	Q6ZTB9	187 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SLC24A4	Q8NFF2	622 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	OR5T1	Q8NG75	326 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	OR10X1	Q8NGY0	326 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	MUC7	Q8TAX7	377 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036		Q8WTZ3	238 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	TIMD4	Q96H15	378 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	YPEL4	Q96NS1	127 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SSX3	Q99909	188 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	SMIM7	Q9BQ49	75 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	GGTLC1	Q9BX51	225 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	TUBA4B	Q9H853	241 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	LINC00574	Q9H8X3	128 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	PLEKHA3	Q9HB20	300 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	MANBAL	Q9NQG1	85 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	TMEM14B	Q9NUH8	114 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036	PXMP4	Q9Y6I8	212 aa		4.05	□□□□□ -1.76
FN1-219	ENST00000474036		A0A087WWC5	75 aa		4.04	□□□□□ -1.76
FN1-219	ENST00000474036	IGHV3-72	A0A0B4J1Y9	119 aa		4.04	□□□□□ -1.76
FN1-219	ENST00000474036	TEX50	A0A1B0GTY4	177 aa		4.04	□□□□□ -1.76
FN1-219	ENST00000474036		A0A1W2PPV4	95 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms