RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TAX1BP3O14907 124 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 CSN3P07498 182 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 PET117Q6UWS5 81 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 RITA1Q96K30 269 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 MUC3AQ02505 3323 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 CBY3A6NI87 242 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 CD40P25942 277 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 FAM27E3Q08E93 113 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 C22orf34Q6ZV56 151 aa11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 CIARTQ8N365 385 aaPredicted RBP11.4□□□□□ -0.58
NHLRC3-204ENST00000473371 TRAV8-1A0A0A6YYK1 113 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 IGHV3-72A0A0B4J1Y9 119 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 MUC21A0A0G2JKD1 596 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 MUC21A0A140T8X8 626 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 TOX4O94842 621 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 CRYGCP07315 174 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 MUC21Q5SSG8 566 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 HTR1DP28221 377 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 FAM71F2Q6NXP2 309 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 TMUB1Q9BVT8 246 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 HSPB8Q9UJY1 196 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 FAM215AQ9Y5M1 114 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 Q86TA4 180 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 SCRT2Q9NQ03 307 aa11.39□□□□□ -0.59
NHLRC3-204ENST00000473371 FAM231BA6NCW3 169 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 A6NJY4 79 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 FCN3O75636 299 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 C8orf46Q8TAG6 207 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 OR2T8A6NH00 312 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 RPL27AP46776 148 aaKnown RBP11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 LINC00311Q8N616 119 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 DEFB125Q8N687 156 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 HIGD1AQ9Y241 93 aa11.38□□□□□ -0.59
NHLRC3-204ENST00000473371 PPIAL4EA0A075B759 164 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 PPIAL4DF5H284 164 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 HAX1O00165 279 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 NDUFB3O43676 98 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 PPIAL4FP0DN26 164 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 MC5RP33032 325 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 LYZP61626 148 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 RHOGP84095 191 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 OTORQ9NRC9 128 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 RNF24Q9Y225 148 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 LOC400499M0QZD8 3231 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 C1orf185Q5T7R7 199 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 ZADH2Q8N4Q0 377 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 TMEM116Q8NCL8 245 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 RP1L1Q8IWN7 2480 aaPredicted RBP11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 LGALS7P47929 136 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 MRGPRG-AS1Q2M3A8 158 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 ANKRD39Q53RE8 183 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 LYPD2Q6UXB3 125 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 EXOC3-AS1Q8N2X6 119 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
NHLRC3-204ENST00000473371 A0A087X0K7 114 aa11.36□□□□□ -0.59
NHLRC3-204ENST00000473371 C17orf100A8MU93 164 aa11.36□□□□□ -0.59
NHLRC3-204ENST00000473371 COTL1Q14019 142 aa11.36□□□□□ -0.59
NHLRC3-204ENST00000473371 AMMECR1LQ6DCA0 310 aa11.36□□□□□ -0.59
NHLRC3-204ENST00000473371 CCL17Q92583 94 aa11.36□□□□□ -0.59
NHLRC3-204ENST00000473371 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 PSG1P11464 419 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 Q71RC1 249 aaPredicted RBP11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 SRSF12Q8WXF0 261 aaKnown RBP11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 A0A1B0GUT8 65 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 PLP1P60201 277 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 ARF6P62330 175 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 ROS1P08922 2347 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 ABCA1O95477 2261 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 TEX45Q8NA69 505 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 NUP37Q8NFH4 326 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 AP5S1Q9NUS5 200 aa11.35□□□□□ -0.59
NHLRC3-204ENST00000473371 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 CNTFRP26992 372 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 RIGQ13278 110 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 LDLRAD2Q5SZI1 272 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 TMEM108Q6UXF1 575 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 WFDC8Q8IUA0 241 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 CD5LO43866 347 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 GPR183P32249 361 aa11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
NHLRC3-204ENST00000473371 IGLV2-11P01706 119 aa11.33□□□□□ -0.59
NHLRC3-204ENST00000473371 ADIPOQQ15848 244 aa11.33□□□□□ -0.59
NHLRC3-204ENST00000473371 FA2HQ7L5A8 372 aa11.33□□□□□ -0.59
NHLRC3-204ENST00000473371 PRSS3P2Q8NHM4 247 aa11.33□□□□□ -0.59
NHLRC3-204ENST00000473371 ASCL2Q99929 193 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms