RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 ARHGEF28Q8N1W1 1705 aaKnown RBP0.12□□□□□ -2.39
COMMD3-211ENST00000472673 ADCY9O60503 1353 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 B4DSR2 109 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 PDE6DO43924 150 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 SRP14P37108 136 aaKnown RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 EIF5AP63241 154 aaKnown RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 AESQ08117 197 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 CIRBPQ14011 172 aaKnown RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 IAH1Q2TAA2 248 aaPredicted RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 PDZD9Q8IXQ8 264 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 TRIM4Q9C037 500 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 PCTPQ9UKL6 214 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 NOSIPQ9Y314 301 aaKnown RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 PHRF1Q9P1Y6 1649 aaKnown RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 SYNE1Q8NF91 8797 aaKnown RBP0.11□□□□□ -2.39
COMMD3-211ENST00000472673 OBSL1O75147 1896 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 PLXNA4Q9HCM2 1894 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 ZFYVE9O95405 1425 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
COMMD3-211ENST00000472673 SMIM23A6NLE4 172 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 F8W1H4 67 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 NDUFB3O43676 98 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 RPP14O95059 124 aaKnown RBP0.1□□□□□ -2.39
COMMD3-211ENST00000472673 IGLV3-1P01715 115 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 TCRBP04435 133 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 AP3S2P59780 193 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 LSM6P62312 80 aaKnown RBP0.1□□□□□ -2.39
COMMD3-211ENST00000472673 KRR1Q13601 381 aaKnown RBP0.1□□□□□ -2.39
COMMD3-211ENST00000472673 SPINK9Q5DT21 86 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 PTRHD1Q6GMV3 140 aaKnown RBP0.1□□□□□ -2.39
COMMD3-211ENST00000472673 C2orf82Q6UX34 121 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 OR51A2Q8NGJ7 313 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 OR5D14Q8NGL3 314 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 GGACTQ9BVM4 153 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.1□□□□□ -2.39
COMMD3-211ENST00000472673 GLTPQ9NZD2 209 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 ANK2Q01484 3957 aa0.1□□□□□ -2.39
COMMD3-211ENST00000472673 ARHGEF11O15085 1522 aa0.09□□□□□ -2.39
COMMD3-211ENST00000472673 KNTC1P50748 2209 aa0.09□□□□□ -2.39
COMMD3-211ENST00000472673 TRAV10A0A0B4J240 114 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 H3BRM9 83 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 NIPSNAP2O75323 286 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 ROMO1P60602 79 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 EDDM3AQ14507 147 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 LYRM7Q5U5X0 104 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 HAGHLQ6PII5 290 aaPredicted RBP0.09□□□□□ -2.4
COMMD3-211ENST00000472673 ZNF833PQ6ZTB9 187 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 OR8J2Q8NGG1 315 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 OR10K1Q8NGX5 313 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 Q8TAT8 98 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 TP53RKQ96S44 253 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 PRRT1Q99946 306 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 SLC25A21Q9BQT8 299 aaPredicted RBP0.09□□□□□ -2.4
COMMD3-211ENST00000472673 TMEM126AQ9H061 195 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 WFDC10AQ9H1F0 79 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 TMEM138Q9NPI0 162 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 CCDC144AA2RUR9 1427 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 PIK3C2GO75747 1445 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 FANCMQ8IYD8 2048 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 OTOGQ6ZRI0 2925 aa0.09□□□□□ -2.4
COMMD3-211ENST00000472673 ANKRD17O75179 2603 aaKnown RBP0.08□□□□□ -2.4
COMMD3-211ENST00000472673 TNS3Q68CZ2 1445 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 NUPR2A6NF83 97 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 J3QRK9 145 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 CST8O60676 142 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 PIGPP57054 158 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 HIST1H3AP68431 136 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 H3F3AP84243 136 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 RRN3P1Q2M238 152 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 C1orf134Q5TEV5 83 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 C4orf22Q6V702 233 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 LINC00575Q6W349 94 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 TEN1Q86WV5 123 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 PSMF1Q92530 271 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 FREM3P0C091 2139 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 SPTBP11277 2137 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 CECR2Q9BXF3 1484 aa0.08□□□□□ -2.4
COMMD3-211ENST00000472673 TNCP24821 2201 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 RTL1A6NKG5 1358 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 PTPRFP10586 1907 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 IGF2RP11717 2491 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 ZGRF1Q86YA3 2104 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 TRAV23DV6A0A075B6W5 121 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 IGLV3-32A0A0A0MS00 114 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 TRGV10A0A0A0MS01 117 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 A8MWV9 139 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 E7EUB6 86 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 ERP29P30040 261 aaKnown RBP0.07□□□□□ -2.4
COMMD3-211ENST00000472673 ATP5G3P48201 142 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 CEBPGP53567 150 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 SPINK7P58062 85 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 TMEM97Q5BJF2 176 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 C22orf39Q6P5X5 142 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 GRINAQ7Z429 371 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 PPP1R14BQ96C90 147 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 ZC2HC1AQ96GY0 325 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 RNF122Q9H9V4 155 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 PLAC8Q9NZF1 115 aa0.07□□□□□ -2.4
COMMD3-211ENST00000472673 LY96Q9Y6Y9 160 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms