RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 ZNF414Q96IQ9 312 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 ATP6V0BQ99437 205 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 C20orf24Q9BUV8 137 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 NMES1Q9C002 83 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 ZNF436Q9C0F3 470 aaPredicted RBP5.07□□□□□ -1.6
SCN9A-206ENST00000472119 MED28Q9H204 178 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 GAR1Q9NY12 217 aaKnown RBP5.07□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM213A2RRL7 107 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 FAM24AA6NFZ4 105 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 C2orf70A6NJV1 201 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 PMS2P5A8MQ11 134 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 PRSS46E5RG02 174 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 NDUFA4O00483 81 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 TSC22D2O75157 780 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 IGKV1-17P01599 117 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 IGLC1P0CG04 106 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 FOLR2P14207 255 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 PVALBP20472 110 aaPredicted RBP5.06□□□□□ -1.6
SCN9A-206ENST00000472119 CBLN1P23435 193 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 OR10J1P30954 320 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 CAV2P51636 162 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 TAS2R30P59541 319 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 SUMO2P61956 95 aaKnown RBP5.06□□□□□ -1.6
SCN9A-206ENST00000472119 RRAS2P62070 204 aaPredicted RBP5.06□□□□□ -1.6
SCN9A-206ENST00000472119 CYCSP99999 105 aaKnown RBP5.06□□□□□ -1.6
SCN9A-206ENST00000472119 RELQ04864 619 aaPredicted RBP5.06□□□□□ -1.6
SCN9A-206ENST00000472119 ARL16Q0P5N6 197 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 TOMM20LQ6UXN7 152 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM14EPQ6UXP3 125 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM116Q8NCL8 245 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 OR11H7Q8NGC8 314 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 PPP1R1CQ8WVI7 109 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 SLC35E1Q96K37 410 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 C11orf1Q9H5F2 150 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 OR5AC2Q9NZP5 309 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 PEMTQ9UBM1 199 aa5.06□□□□□ -1.6
SCN9A-206ENST00000472119 PUS1Q9Y606 427 aaKnown RBP eCLIP5.06□□□□□ -1.6
SCN9A-206ENST00000472119 FBN3Q75N90 2809 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGKV1D-37A0A075B6S9 117 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGHV3OR16-13A0A075B7E8 117 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 TRAV30A0A087WSZ9 112 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGHV3-49A0A0A0MS15 119 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGHV3-74A0A0B4J1X5 117 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGSF23A1L1A6 192 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 SMCO3A2RU48 225 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IZUMO1RA6ND01 250 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 DEDDO75618 318 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 CST7O76096 145 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGLV1-51P01701 117 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 RLN2P04090 185 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 INSL3P51460 131 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 DEFA6Q01524 100 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 ZNF90Q03938 601 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 KPRPQ5T749 579 aaPredicted RBP5.05□□□□□ -1.6
SCN9A-206ENST00000472119 ZNF600Q6ZNG1 722 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 ACOT7LQ6ZUV0 252 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM252Q8N6L7 170 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM217Q8N7C4 229 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 OR10P1Q8NGE3 313 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 OR1S2Q8NGQ3 325 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM190Q8WZ59 177 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 RNF126Q9BV68 326 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 GPR61Q9BZJ8 451 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 UFC1Q9Y3C8 167 aa5.05□□□□□ -1.6
SCN9A-206ENST00000472119 IGKV1OR2-108A0A075B7D4 117 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 IGHV3-66A0A0C4DH42 116 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 ZFP92A6NM28 416 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 A8MWP6 167 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 K7EMT4 169 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 SCGB2A1O75556 95 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 MPC2O95563 127 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 APOHP02749 345 aaPredicted RBP5.04□□□□□ -1.6
SCN9A-206ENST00000472119 RD3LP0DJH9 198 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 C8orf88P0DMB2 117 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 YPEL3P61236 119 aaPredicted RBP5.04□□□□□ -1.6
SCN9A-206ENST00000472119 AKR1C1Q04828 323 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 EGFEM1PQ0D2K5 195 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 OR2F1Q13607 317 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 DEFB114Q30KQ6 69 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 BTNL8Q6UX41 500 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 DYNLRB2Q8TF09 96 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 Q8WTZ3 238 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 DAZ1Q9NQZ3 744 aaKnown RBP5.04□□□□□ -1.6
SCN9A-206ENST00000472119 LYRM2Q9NU23 88 aaPredicted RBP5.04□□□□□ -1.6
SCN9A-206ENST00000472119 SIGLEC8Q9NYZ4 499 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 MRPL27Q9P0M9 148 aaKnown RBP5.04□□□□□ -1.6
SCN9A-206ENST00000472119 MLXQ9UH92 298 aa5.04□□□□□ -1.6
SCN9A-206ENST00000472119 ZNF256Q9Y2P7 627 aaPredicted RBP5.04□□□□□ -1.6
SCN9A-206ENST00000472119 IGHV7-4-1A0A0J9YVY3 117 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 WI2-2373I1.2A0A1W2PRP0 233 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 E5RGE8 158 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 IL4P05112 153 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 NPPCP23582 126 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 GATA2P23769 480 aaPredicted RBP5.03□□□□□ -1.6
SCN9A-206ENST00000472119 SULT1A1P50225 295 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 DLK1P80370 383 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 SLC38A11Q08AI6 406 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 Q5BKY6 102 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 TMEM182Q6ZP80 229 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms