RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 SACSQ9NZJ4 4579 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 IGKV1-17P01599 117 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 SLC25A4P12235 298 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 CCR6P51684 374 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 AP3S2P59780 193 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 RBMS2Q15434 407 aaKnown RBP9.69□□□□□ -0.86
LTA-215ENST00000471842 ETFRF1Q6IPR1 90 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 STHQ8IWL8 128 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 TMEM217Q8N7C4 229 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 RNASEH2CQ8TDP1 164 aaKnown RBP9.69□□□□□ -0.86
LTA-215ENST00000471842 NPIPB3Q92617 1050 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 IL22RA2Q969J5 263 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 V9GYH0 126 aa9.69□□□□□ -0.86
LTA-215ENST00000471842 IL4P05112 153 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 RAB5BP61020 215 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 SUPT4H1P63272 117 aaKnown RBP9.68□□□□□ -0.86
LTA-215ENST00000471842 SRPXP78539 464 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 DHRS2Q13268 280 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 KLF9Q13886 244 aaPredicted RBP9.68□□□□□ -0.86
LTA-215ENST00000471842 TMEM170AQ8WVE7 144 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 RARRES2Q99969 163 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
LTA-215ENST00000471842 A0A0B4J2A0 478 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 A0A1B0GV90 55 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 NUPR2A6NF83 97 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 L7N2F9 121 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 DEFB4AO15263 64 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 LY6G6CO95867 125 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 IAPPP10997 89 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 PVALBP20472 110 aaPredicted RBP9.67□□□□□ -0.86
LTA-215ENST00000471842 CRYBB3P26998 211 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 INPP1P49441 399 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 NMSQ5H8A3 153 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 OR11H2Q8NH07 326 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 MED28Q9H204 178 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 SHPKQ9UHJ6 478 aa9.67□□□□□ -0.86
LTA-215ENST00000471842 TCAPO15273 167 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 MBP02144 154 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 RD3LP0DJH9 198 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 USF2Q15853 346 aaPredicted RBP9.66□□□□□ -0.86
LTA-215ENST00000471842 C16orf54Q6UWD8 224 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 HSPB7Q9UBY9 170 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 FBXL17Q9UF56 701 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 CACFD1Q9UGQ2 172 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 TRAV2A0A0B4J234 112 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 HELTA6NFD8 242 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 ZFP92A6NM28 416 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 K7EQG2 157 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
LTA-215ENST00000471842 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 GATAD1Q8WUU5 269 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 SLC35E1Q96K37 410 aa9.66□□□□□ -0.86
LTA-215ENST00000471842 MPC2O95563 127 aa9.65□□□□□ -0.87
LTA-215ENST00000471842 TOMM40O96008 361 aa9.65□□□□□ -0.87
LTA-215ENST00000471842 ZNF79Q15937 498 aa9.65□□□□□ -0.87
LTA-215ENST00000471842 TMEM128Q5BJH2 165 aa9.65□□□□□ -0.87
LTA-215ENST00000471842 UQCC3Q6UW78 93 aa9.65□□□□□ -0.87
LTA-215ENST00000471842 OR51G1Q8NGK1 321 aa9.65□□□□□ -0.87
LTA-215ENST00000471842 KLK5Q9Y337 293 aaPredicted RBP9.65□□□□□ -0.87
LTA-215ENST00000471842 FAM240BA0A1B0GVZ2 78 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 C7orf66A4D0T2 115 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 INMT-MINDY4F8WBC2 141 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 TEX46H3BTG2 121 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 APOC3P02656 99 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 PSG1P11464 419 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 NANOS2P60321 138 aaKnown RBP9.64□□□□□ -0.87
LTA-215ENST00000471842 LYZP61626 148 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 FAM74A3Q4VXF1 159 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 TRIQKQ629K1 86 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
LTA-215ENST00000471842 MAGT1Q9H0U3 335 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 TMPRSS5Q9H3S3 457 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 LYSTQ99698 3801 aa9.64□□□□□ -0.87
LTA-215ENST00000471842 PIGBOS1A0A0B4J2F0 54 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 CIDEAO60543 219 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 HOXB5P09067 269 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 RAB11AP62491 216 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 PPP1R1AQ13522 171 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 OR2F1Q13607 317 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 LGALSLQ3ZCW2 172 aaPredicted RBP9.63□□□□□ -0.87
LTA-215ENST00000471842 SIGLEC15Q6ZMC9 328 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 GLMPQ8WWB7 406 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 LINC00476Q8WZB0 136 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 RNF125Q96EQ8 232 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 CLEC5AQ9NY25 188 aa9.63□□□□□ -0.87
LTA-215ENST00000471842 PLA2G10O15496 165 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 SFT2D2O95562 160 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 NMBP08949 121 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 RAB2AP61019 212 aa9.62□□□□□ -0.87
LTA-215ENST00000471842 SNRPD3P62318 126 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms