RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 SYNGR2O43760 224 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 MED6O75586 246 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
COL1A1-203ENST00000471344 TMEM41BQ5BJD5 291 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 OR8G2PQ6IF36 304 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 TMEM182Q6ZP80 229 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-203ENST00000471344 THAP8Q8NA92 274 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-203ENST00000471344 SEC22CQ9BRL7 303 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 SEPSECSQ9HD40 501 aaKnown RBP11.1□□□□□ -0.63
COL1A1-203ENST00000471344 NUDT15Q9NV35 164 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 XCL2Q9UBD3 114 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 CELA1Q9UNI1 258 aa11.1□□□□□ -0.63
COL1A1-203ENST00000471344 SOCS3O14543 225 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 GATA2P23769 480 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-203ENST00000471344 NUP62P37198 522 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-203ENST00000471344 FXYD7P58549 80 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 RAB11AP62491 216 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 SPANXN5Q5MJ07 72 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 Q6ZTC4 211 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 ZNF767PQ75MW2 155 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 TRGV9Q99603 122 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 PFDN2Q9UHV9 154 aa11.09□□□□□ -0.63
COL1A1-203ENST00000471344 FABP1P07148 127 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 MIFP14174 115 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 HLA-DMBP28068 263 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
COL1A1-203ENST00000471344 PRR20EP86478 221 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 PRR20CP86479 221 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 PRR20DP86480 221 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 PRR20BP86481 221 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 PRR20AP86496 221 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 C4orf46Q504U0 113 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
COL1A1-203ENST00000471344 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 SNRPGP15A8MWD9 76 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 F6UB75 175 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 CCNKO75909 580 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 NKX2-1P43699 371 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-203ENST00000471344 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL1A1-203ENST00000471344 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 ACOT7LQ6ZUV0 252 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 PPP1R14BQ96C90 147 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 SLC25A32Q9H2D1 315 aa11.07□□□□□ -0.64
COL1A1-203ENST00000471344 FAM240BA0A1B0GVZ2 78 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 IGLL5B9A064 214 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 CCSO14618 274 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 H2AFB2P0C5Z0 115 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 NRARPQ7Z6K4 114 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 MITD1Q8WV92 249 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 SCRT1Q9BWW7 348 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 HRH4Q9H3N8 390 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 SLC25A22Q9H936 323 aa11.06□□□□□ -0.64
COL1A1-203ENST00000471344 SSSCA1O60232 199 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 PSMB3P49720 205 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 ID3Q02535 119 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 AKR1C1Q04828 323 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 C1orf194Q5T5A4 169 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 OR8I2Q8N0Y5 310 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 ZNF709Q8N972 641 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 OR4D5Q8NGN0 318 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 COQ8AQ8NI60 647 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 SAV1Q9H4B6 383 aaPredicted RBP11.05□□□□□ -0.64
COL1A1-203ENST00000471344 DNAH2Q9P225 4427 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
COL1A1-203ENST00000471344 STRAPQ9Y3F4 350 aaKnown RBP11.05□□□□□ -0.64
COL1A1-203ENST00000471344 PMS2P5A8MQ11 134 aa11.04□□□□□ -0.64
COL1A1-203ENST00000471344 CFDP00746 253 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-203ENST00000471344 ORM2P19652 201 aa11.04□□□□□ -0.64
COL1A1-203ENST00000471344 C12orf74Q32Q52 190 aa11.04□□□□□ -0.64
COL1A1-203ENST00000471344 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
COL1A1-203ENST00000471344 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
COL1A1-203ENST00000471344 DOK5Q9P104 306 aa11.04□□□□□ -0.64
COL1A1-203ENST00000471344 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 SMCO3A2RU48 225 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 ZNF98A6NK75 572 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 PAX9P55771 341 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
COL1A1-203ENST00000471344 RRAS2P62070 204 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-203ENST00000471344 IGFL4Q6B9Z1 124 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 ZNF705AQ6ZN79 300 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-203ENST00000471344 OR4B1Q8NGF8 309 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-203ENST00000471344 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 PSENENQ9NZ42 101 aa11.03□□□□□ -0.64
COL1A1-203ENST00000471344 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-203ENST00000471344 C11orf94C9JXX5 98 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 ISLRO14498 428 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 SCGB1D2O95969 90 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 IFNA21P01568 189 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms