RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SAA2P0DJI9 122 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 HLA-GP17693 338 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 PMCHP20382 165 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 HTR1DP28221 377 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 KIR2DS2P43631 304 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 GNG10P50151 68 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 SUPT4H1P63272 117 aaKnown RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 CATR1Q13166 79 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 DHRS2Q13268 280 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 PPP1R1AQ13522 171 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 EIF4EBP1Q13541 118 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 HLA-DRB5Q30154 266 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 RPL39P5Q59GN2 51 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 MINOS1Q5TGZ0 78 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 GPR157Q5UAW9 335 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 HCP5Q6MZN7 132 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 Q6ZN92 141 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF833PQ6ZTB9 187 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 LGI3Q8N145 548 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 PNKDQ8N490 385 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 C12orf45Q8N5I9 185 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 TEX29Q8N6K0 151 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 WFDC11Q8NEX6 87 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 LYPD6BQ8NI32 183 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 COQ8AQ8NI60 647 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 CAPSLQ8WWF8 208 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 IL22RA2Q969J5 263 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 MALSU1Q96EH3 234 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM56Q96MV1 263 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 TBX15Q96SF7 602 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 PHB2Q99623 299 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF251Q9BRH9 671 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 BEX2Q9BXY8 128 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM222Q9H0R3 208 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 MED28Q9H204 178 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 OR51M1Q9H341 326 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 NAA60Q9H7X0 242 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 BEX1Q9HBH7 125 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 SIRT7Q9NRC8 400 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 TBL2Q9Y4P3 447 aaKnown RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 ALG5Q9Y673 324 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 MINOS1-NBL1R4GNA1 71 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM56-RWDD3S4R434 201 aa3.43□□□□□ -1.86
CCDC39-202ENST00000471307 FLNAP21333 2647 aaKnown RBP3.43□□□□□ -1.86
CCDC39-202ENST00000471307 CSMD2Q7Z408 3487 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV1-69DA0A0B4J2H0 117 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 CENPVL3A0A0U1RRI6 287 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 A0A1B0GVG6 124 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 DUXBA0A1W2PPF3 345 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 NPFFO15130 113 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 SSNA1O43805 119 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 HPRT1P00492 218 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 IFNA21P01568 189 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV1-69P01742 117 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 APOA2P02652 100 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 OR5AC1P0C628 307 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 TRAPPC2P0DI81 140 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 TRAPPC2BP0DI82 140 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 CT45A6P0DMU7 189 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 CT45A5P0DMU8 189 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 CT45A7P0DMV0 189 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 COX7A1P24310 79 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 LPAR6P43657 344 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 TFPI2P48307 235 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 RRAS2P62070 204 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF816Q0VGE8 651 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-202ENST00000471307 SLC9A3R2Q15599 337 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 SP6Q3SY56 376 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 TPTE2P1Q5T6R2 138 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 ACOT7LQ6ZUV0 252 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF695Q8IW36 515 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 OR4P4Q8NGL7 312 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 OR51H1Q8NH63 302 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 CASTOR1Q8WTX7 329 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 ASB13Q8WXK3 278 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 RBPMSQ93062 196 aaKnown RBP3.42□□□□□ -1.86
CCDC39-202ENST00000471307 RPEQ96AT9 228 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 TP53RKQ96S44 253 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 RNF5Q99942 180 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 SEC22CQ9BRL7 303 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 ACTR3CQ9C0K3 210 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-202ENST00000471307 KLK12Q9UKR0 248 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 GOLT1BQ9Y3E0 138 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 NAV3Q8IVL0 2385 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 TLN2Q9Y4G6 2542 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 ACANP16112 2415 aa3.42□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV1-3A0A0C4DH29 117 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 LYRM9A8MSI8 78 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 H0YJW9 148 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 H7C2Y5 167 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 CD5LO43866 347 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 OR2A4O95047 310 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 HRASP01112 189 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 SLC25A6P12236 298 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 VDAC1P21796 283 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 BRS3P32247 399 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 LGALS7P47929 136 aa3.41□□□□□ -1.86
CCDC39-202ENST00000471307 RAB13P51153 203 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms