RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 RPRMLQ8N4K4 120 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 NPSP0C0P6 89 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 TFF1P04155 84 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 OCIAD2Q56VL3 154 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 GAFA1Q96PS6 74 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 FOXC2Q99958 501 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 TMEM160Q9NX00 188 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
RRP1B-202ENST00000470886 H3BUT2 72 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 DPM2O94777 84 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 HAPLN4Q86UW8 402 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 GATA4P43694 442 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 GAGE1Q13065 139 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 ZNF329Q86UD4 541 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
RRP1B-202ENST00000470886 YAE1D1Q9NRH1 226 aa8.61□□□□□ -1.03
RRP1B-202ENST00000470886 COL4A2P08572 1712 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 RNASE6Q93091 150 aaKnown RBP8.6□□□□□ -1.03
RRP1B-202ENST00000470886 FNDC4Q9H6D8 234 aaPredicted RBP8.6□□□□□ -1.03
RRP1B-202ENST00000470886 ORMDL2Q53FV1 153 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 OR2K2Q8NGT1 345 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 SCGB3A1Q96QR1 104 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 EREGO14944 169 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 IGHV1-8P0DP01 117 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 ESDP10768 282 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 SRSF1Q07955 248 aaKnown RBP eCLIP8.6□□□□□ -1.03
RRP1B-202ENST00000470886 POU2AF1Q16633 256 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 AMMECR1LQ6DCA0 310 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 H7C1H1 209 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 LEPP41159 167 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 TMEM200BQ69YZ2 307 aa8.6□□□□□ -1.03
RRP1B-202ENST00000470886 C18orf15Q96N68 181 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 SNHG12Q9BXW3 62 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 TMEM262E9PQX1 116 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 PAX2Q02962 417 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 Q8TCH9 128 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 MED12Q93074 2177 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 CD5LO43866 347 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 PSG1P11464 419 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 PDE6HQ13956 83 aa8.59□□□□□ -1.03
RRP1B-202ENST00000470886 ZCCHC24Q8N2G6 241 aaKnown RBP8.59□□□□□ -1.03
RRP1B-202ENST00000470886 PDLIM4P50479 330 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 V9GYV3 84 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 RTTNQ86VV8 2226 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 TMEM105Q8N8V8 129 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 SPTA1P02549 2419 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 IGHV2-26A0A0B4J1V2 119 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
RRP1B-202ENST00000470886 TEX43Q6ZNM6 134 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 ZNF418Q8TF45 676 aaPredicted RBP8.58□□□□□ -1.04
RRP1B-202ENST00000470886 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 TRAV8-2A0A0B4J237 113 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 CGB1A6NKQ9 187 aa8.58□□□□□ -1.04
RRP1B-202ENST00000470886 SNRPD3P62318 126 aaKnown RBP8.58□□□□□ -1.04
RRP1B-202ENST00000470886 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 IGKCP01834 107 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 SS18L2Q9UHA2 77 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 RAXQ9Y2V3 346 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 IGHV1-3A0A0C4DH29 117 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 C15orf65H3BRN8 121 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 SRSF6Q13247 344 aaKnown RBP8.57□□□□□ -1.04
RRP1B-202ENST00000470886 PSG3Q16557 428 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 NDUFA4L2Q9NRX3 87 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 MRPL16Q9NX20 251 aaKnown RBP8.57□□□□□ -1.04
RRP1B-202ENST00000470886 SPINK8P0C7L1 97 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 Q86TA4 180 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 WFDC3Q8IUB2 231 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 LINC00311Q8N616 119 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 MRAP2Q96G30 205 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 SVILO95425 2214 aa8.57□□□□□ -1.04
RRP1B-202ENST00000470886 TRGV3P03979 118 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 VKORC1Q9BQB6 163 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 PRDM6Q9NQX0 595 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 SIGLEC9Q9Y336 463 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 TRAV21A0A0B4J279 112 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 IGLC2P0DOY2 106 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 IGLC3P0DOY3 106 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 RPL15P61313 204 aaKnown RBP8.56□□□□□ -1.04
RRP1B-202ENST00000470886 C10orf55Q5SWW7 151 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 MINOS1Q5TGZ0 78 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 ZNF833PQ6ZTB9 187 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 MINOS1-NBL1R4GNA1 71 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 SNAI2O43623 268 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 CDKN1BP46527 198 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
RRP1B-202ENST00000470886 TIMM23O14925 209 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms