RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 SDHCQ99643 169 aaPredicted RBP9.69□□□□□ -0.86
EFNA1-203ENST00000469878 SLC35B3Q9H1N7 401 aa9.69□□□□□ -0.86
EFNA1-203ENST00000469878 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
EFNA1-203ENST00000469878 BATF3Q9NR55 127 aa9.69□□□□□ -0.86
EFNA1-203ENST00000469878 WRBO00258 174 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 ADAP1O75689 374 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 EMP1P54849 157 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 TCTAP57738 103 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 AP3S2P59780 193 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 GGNBP1Q5YKI7 109 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 PPP1R14BQ96C90 147 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 SLC25A32Q9H2D1 315 aa9.68□□□□□ -0.86
EFNA1-203ENST00000469878 DEFB131BA0A096LNP1 70 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 ZNF705FA8MVS1 300 aaPredicted RBP9.67□□□□□ -0.86
EFNA1-203ENST00000469878 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 SYNGR2O43760 224 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 ZNF705DP0CH99 300 aaPredicted RBP9.67□□□□□ -0.86
EFNA1-203ENST00000469878 ZNF705BP0CI00 300 aaPredicted RBP9.67□□□□□ -0.86
EFNA1-203ENST00000469878 PSMB3P49720 205 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 ATP5IP56385 69 aaPredicted RBP9.67□□□□□ -0.86
EFNA1-203ENST00000469878 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
EFNA1-203ENST00000469878 RAB11AP62491 216 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 FOXI2Q6ZQN5 318 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 OR4B1Q8NGF8 309 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 COQ8AQ8NI60 647 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 C1QTNF4Q9BXJ3 329 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 SRRQ9GZT4 340 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 SLC25A22Q9H936 323 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
EFNA1-203ENST00000469878 CCNKO75909 580 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 AMBPP02760 352 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 PRB4P10163 310 aaPredicted RBP9.66□□□□□ -0.86
EFNA1-203ENST00000469878 SLC25A6P12236 298 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 NUP62P37198 522 aaPredicted RBP9.66□□□□□ -0.86
EFNA1-203ENST00000469878 BAK1Q16611 211 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 SPANXN5Q5MJ07 72 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 IGFL4Q6B9Z1 124 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 ACOT7LQ6ZUV0 252 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 OR8I2Q8N0Y5 310 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 SLC25A21Q9BQT8 299 aaPredicted RBP9.66□□□□□ -0.86
EFNA1-203ENST00000469878 KRTAP17-1Q9BYP8 105 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 FLVCR2Q9UPI3 526 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 TMED3Q9Y3Q3 217 aa9.66□□□□□ -0.86
EFNA1-203ENST00000469878 A0A0J9YX75 114 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 POLR2GP62487 172 aaKnown RBP eCLIP9.65□□□□□ -0.86
EFNA1-203ENST00000469878 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 C1orf158Q8N1D5 194 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 RNF126Q9BV68 326 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 DOK5Q9P104 306 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.86
EFNA1-203ENST00000469878 LINC00854A0A1B0GVQ3 168 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 C9orf170A2RU37 121 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 ISLRO14498 428 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 MED6O75586 246 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 PRM2P04554 102 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 FABP1P07148 127 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 ORM2P19652 201 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 ID1P41134 155 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 PAX9P55771 341 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 AKR1C1Q04828 323 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 SPANXN2Q5MJ10 180 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 C16orf92Q96LL3 132 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 NEU1Q99519 415 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 RSG1Q9BU20 258 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 DNAH2Q9P225 4427 aa9.64□□□□□ -0.87
EFNA1-203ENST00000469878 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 BTCP35070 178 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 CIB3Q96Q77 187 aaPredicted RBP9.63□□□□□ -0.87
EFNA1-203ENST00000469878 PTTG2Q9NZH5 202 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 PFDN2Q9UHV9 154 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 HERC2O95714 4834 aa9.63□□□□□ -0.87
EFNA1-203ENST00000469878 PIGBOS1A0A0B4J2F0 54 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 SMCO3A2RU48 225 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 SSSCA1O60232 199 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 NDUFB6O95139 128 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 SPART-AS1P0CW21 52 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 UBE2MP61081 183 aaKnown RBP9.62□□□□□ -0.87
EFNA1-203ENST00000469878 PSG9Q00887 426 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 ID3Q02535 119 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 EBLN2Q6P2I7 272 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 OR4D5Q8NGN0 318 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 CLUHP3Q96NS8 147 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 DKK2Q9UBU2 259 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 STRAPQ9Y3F4 350 aaKnown RBP9.62□□□□□ -0.87
EFNA1-203ENST00000469878 RFNGQ9Y644 331 aa9.62□□□□□ -0.87
EFNA1-203ENST00000469878 H3BRN7 92 aa9.61□□□□□ -0.87
EFNA1-203ENST00000469878 ANXA7P20073 488 aaKnown RBP9.61□□□□□ -0.87
EFNA1-203ENST00000469878 GALR1P47211 349 aa9.61□□□□□ -0.87
EFNA1-203ENST00000469878 RRAS2P62070 204 aaPredicted RBP9.61□□□□□ -0.87
EFNA1-203ENST00000469878 RPP30P78346 268 aaKnown RBP9.61□□□□□ -0.87
EFNA1-203ENST00000469878 LINC00299Q6ZSB3 139 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms