RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 LINC00473A8K010 186 aa12.92□□□□□ -0.34
BRAT1-204ENST00000469750 HBDP02042 147 aa12.92□□□□□ -0.34
BRAT1-204ENST00000469750 TRAV8-2A0A0B4J237 113 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 RPL15P61313 204 aaKnown RBP12.91□□□□□ -0.34
BRAT1-204ENST00000469750 Q6ZS49 121 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 KIR3DL3Q8N743 410 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 TRGV4A0A0C4DH28 118 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 COL8A2P25067 703 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 SPATA31B1PQ5VZV4 182 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 OR2K2Q8NGT1 345 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 SCRT1Q9BWW7 348 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 CMC4P56277 68 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-204ENST00000469750 C1orf194Q5T5A4 169 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 MGST2Q99735 147 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 FNDC1Q4ZHG4 1894 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-204ENST00000469750 NPIPB5A8MRT5 1133 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 TYMSP04818 313 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 LHFPL4Q7Z7J7 247 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 CYTL1Q9NRR1 136 aa12.91□□□□□ -0.34
BRAT1-204ENST00000469750 TRAV1-1A0A0B4J248 108 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 CITED1Q99966 193 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 TCF20Q9UGU0 1960 aaKnown RBP12.9□□□□□ -0.34
BRAT1-204ENST00000469750 PI4KAP42356 2102 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 PLXNA3P51805 1871 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 K7ENP7 123 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 HGFACQ04756 655 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 ORMDL2Q53FV1 153 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 ZFAND6Q6FIF0 208 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 LYPD2Q6UXB3 125 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 CRIM1Q9NZV1 1036 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 SIGLEC9Q9Y336 463 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 CACNA1BQ00975 2339 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 SLC25A16P16260 332 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 UBE2V1Q13404 147 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
BRAT1-204ENST00000469750 IGKV2-40A0A087WW87 121 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-204ENST00000469750 IGKV2D-40P01614 121 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-204ENST00000469750 CD5P06127 495 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 KLF17Q5JT82 389 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-204ENST00000469750 ATP5L2Q7Z4Y8 100 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 TRBV7-1A0A0A6YYK4 115 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 E7EQL1 145 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 SAP30O75446 220 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 SEC11AP67812 179 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 C3orf36Q3SXR2 165 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 ASCL4Q6XD76 172 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-204ENST00000469750 ZNF581Q9P0T4 197 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
BRAT1-204ENST00000469750 SEPSECSQ9HD40 501 aaKnown RBP12.89□□□□□ -0.35
BRAT1-204ENST00000469750 APOMO95445 188 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 EXOC3-AS1Q8N2X6 119 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
BRAT1-204ENST00000469750 LY6HO94772 140 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 FHL1Q13642 323 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 ARTNQ5T4W7 220 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 DIDO1Q9BTC0 2240 aaKnown RBP12.88□□□□□ -0.35
BRAT1-204ENST00000469750 ESDP10768 282 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 NBASA2RRP1 2371 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 MALP21145 153 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
BRAT1-204ENST00000469750 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-204ENST00000469750 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 GBF1Q92538 1859 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 AMBPP02760 352 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 USMG5Q96IX5 58 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 TMEM242Q9NWH2 141 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 LY6G6EA0A0G2JKS1 128 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 TCRAP04437 139 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 PRTN3P24158 256 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 U3KQA8 63 aa12.87□□□□□ -0.35
BRAT1-204ENST00000469750 EVI2AP22794 236 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 DPM2O94777 84 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 HEATR1Q9H583 2144 aaKnown RBP12.86□□□□□ -0.35
BRAT1-204ENST00000469750 A0A1B0GW64 132 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-204ENST00000469750 PRR30Q53SZ7 412 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-204ENST00000469750 PYY3Q5JQD4 70 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
BRAT1-204ENST00000469750 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 CD28P10747 220 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 NTF4P34130 210 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 TDGF1P3P51864 188 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 ZNF138P52744 262 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
BRAT1-204ENST00000469750 RBMY1BA6NDE4 496 aaKnown RBP12.85□□□□□ -0.35
BRAT1-204ENST00000469750 RBMY1EA6NEQ0 496 aaKnown RBP12.85□□□□□ -0.35
BRAT1-204ENST00000469750 RBMY1DP0C7P1 496 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms