RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 A0A1W2PPQ1 181 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 CDS2O95674 445 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 MEOX2P50222 304 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 XGP55808 180 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 OR11H7Q8NGC8 314 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 LHFPL5Q8TAF8 219 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 TMEM222Q9H0R3 208 aa12.65□□□□□ -0.38
TTC28-205ENST00000469670 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 CNN1P51911 297 aaKnown RBP12.64□□□□□ -0.39
TTC28-205ENST00000469670 NEDD8Q15843 81 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 OR13C8Q8NGS7 320 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 FRZBQ92765 325 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 RBPMSQ93062 196 aaKnown RBP12.64□□□□□ -0.39
TTC28-205ENST00000469670 UPK3BQ9BT76 320 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 COMMD3Q9UBI1 195 aa12.64□□□□□ -0.39
TTC28-205ENST00000469670 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 DUSP14O95147 198 aaKnown RBP12.63□□□□□ -0.39
TTC28-205ENST00000469670 APOA1P02647 267 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 CD3DP04234 171 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 MEF2DQ14814 521 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 RNASE12Q5GAN4 147 aaKnown RBP12.63□□□□□ -0.39
TTC28-205ENST00000469670 GPR141Q7Z602 305 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 SELENOHQ8IZQ5 122 aaKnown RBP12.63□□□□□ -0.39
TTC28-205ENST00000469670 GLYATL2Q8WU03 294 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 PGPEP1Q9NXJ5 209 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 ZNF586Q9NXT0 402 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 PTTG2Q9NZH5 202 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 VPS13BQ7Z7G8 4022 aa12.63□□□□□ -0.39
TTC28-205ENST00000469670 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
TTC28-205ENST00000469670 GAMTQ14353 236 aa12.62□□□□□ -0.39
TTC28-205ENST00000469670 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
TTC28-205ENST00000469670 U3KQ87 197 aa12.62□□□□□ -0.39
TTC28-205ENST00000469670 TRAV12-2A0A075B6T6 113 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
TTC28-205ENST00000469670 FABP1P07148 127 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 FUSP35637 526 aaKnown RBP eCLIP12.61□□□□□ -0.39
TTC28-205ENST00000469670 GALR1P47211 349 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 OR5I1Q13606 314 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 OR2F1Q13607 317 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 ESRGQ1W209 222 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 TERB2Q8NHR7 220 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 MARCH1Q8TCQ1 289 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 C17orf77Q96MU5 243 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 LINC01587Q99440 93 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 RSG1Q9BU20 258 aa12.61□□□□□ -0.39
TTC28-205ENST00000469670 TIMM8BQ9Y5J9 83 aaPredicted RBP12.61□□□□□ -0.39
TTC28-205ENST00000469670 TRAV26-1A0A087WT03 109 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 LINC00315P59091 139 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 LSM3P62310 102 aaKnown RBP12.6□□□□□ -0.39
TTC28-205ENST00000469670 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 LGI3Q8N145 548 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 RXFP4Q8TDU9 374 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 ZNF503Q96F45 646 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 SLC35E1Q96K37 410 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 SLC25A32Q9H2D1 315 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 CACFD1Q9UGQ2 172 aa12.6□□□□□ -0.39
TTC28-205ENST00000469670 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
TTC28-205ENST00000469670 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 GABARAPO95166 117 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 TNFAIP8O95379 198 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 HTN1P15515 57 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 TBPP20226 339 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 M6PRP20645 277 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 GPX4P36969 197 aaPredicted RBP12.59□□□□□ -0.39
TTC28-205ENST00000469670 TAS2R60P59551 318 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 TMEM268Q5VZI3 342 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 IGFL4Q6B9Z1 124 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 Q6ZRN7 208 aaPredicted RBP12.59□□□□□ -0.39
TTC28-205ENST00000469670 C18orf15Q96N68 181 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 SLC25A39Q9BZJ4 359 aaPredicted RBP12.59□□□□□ -0.39
TTC28-205ENST00000469670 NAA60Q9H7X0 242 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 SLC25A22Q9H936 323 aa12.59□□□□□ -0.39
TTC28-205ENST00000469670 A0A0J9YY99 117 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 BOLA2-SMG1P6H3BVE0 249 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 SULT1A3P0DMM9 295 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 SULT1A4P0DMN0 295 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
TTC28-205ENST00000469670 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 OR10J6PQ8NGY7 276 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 DTD1Q8TEA8 209 aa12.58□□□□□ -0.4
TTC28-205ENST00000469670 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
TTC28-205ENST00000469670 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.4
TTC28-205ENST00000469670 FLG2Q5D862 2391 aaPredicted RBP12.57□□□□□ -0.4
TTC28-205ENST00000469670 EREGO14944 169 aa12.57□□□□□ -0.4
TTC28-205ENST00000469670 HPGDSO60760 199 aa12.57□□□□□ -0.4
TTC28-205ENST00000469670 CDPF1Q6NVV7 123 aa12.57□□□□□ -0.4
TTC28-205ENST00000469670 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
TTC28-205ENST00000469670 OR52I2Q8NH67 350 aa12.57□□□□□ -0.4
TTC28-205ENST00000469670 TRGV9Q99603 122 aa12.57□□□□□ -0.4
TTC28-205ENST00000469670 RTBDNQ9BSG5 229 aaPredicted RBP12.57□□□□□ -0.4
TTC28-205ENST00000469670 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 ZNF98A6NK75 572 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 ZNF701M0R085 212 aaPredicted RBP12.56□□□□□ -0.4
TTC28-205ENST00000469670 RNF182Q8N6D2 247 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms