RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FOXG1P55316 489 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-207ENST00000468925 ERVK-16P61578 105 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 TWIST1Q15672 202 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 CST6Q15828 149 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 TBC1D28Q2M2D7 210 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 KRTAP27-1Q3LI81 207 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 PIGYQ3MUY2 71 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 KLF17Q5JT82 389 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-207ENST00000468925 LY6G5CQ5SRR4 150 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 RNF144BQ7Z419 303 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 PDPNQ86YL7 162 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C1orf210Q8IVY1 113 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 ZDHHC23Q8IYP9 409 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 RBMXL3Q8N7X1 1067 aaKnown RBP3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C11orf44Q8N8P7 122 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 OR1L4Q8NGR5 311 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 IL1F10Q8WWZ1 152 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 TMEM158Q8WZ71 300 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 PIGCQ92535 297 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 IFI27L1Q96BM0 104 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 SNRNP40Q96DI7 357 aaKnown RBP3.93□□□□□ -1.78
SF3B1-207ENST00000468925 FMC1Q96HJ9 113 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 LINC00479Q96M42 142 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 CHAC1Q9BUX1 264 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 RTL8AQ9BWD3 113 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C1QTNF5Q9BXJ0 243 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 PRSS22Q9GZN4 317 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 ENY2Q9NPA8 101 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 OCIAD1Q9NX40 245 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 ONECUT1Q9UBC0 465 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 Q9UFV3 132 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 AMMECR1Q9Y4X0 333 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-207ENST00000468925 KLF12Q9Y4X4 402 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 PKD1L2Q7Z442 2459 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 TRAV5A0A0B4J249 113 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1-12A0A0C4DH73 117 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 SMIM9A6NGZ8 99 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 MANSC4A6NHS7 340 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 MGST3O14880 152 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 HOXA3O43365 443 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 NXPH3O95157 252 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1D-12P01611 117 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 P01737 135 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 MT-ATP8P03928 68 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 CLPSP04118 112 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 CRYGBP07316 175 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 EDN2P20800 178 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 XGP55808 180 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 FOXE3Q13461 319 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 OR1C1Q15619 314 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 C12orf74Q32Q52 190 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 UTF1Q5T230 341 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 RPS19BP1Q86WX3 136 aaKnown RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 TMEM178AQ8NBL3 297 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 NFAM1Q8NET5 270 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 OR11H6Q8NGC7 330 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 FAM110DQ8TAY7 271 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 CYYR1Q96J86 154 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 RITA1Q96K30 269 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 MGST2Q99735 147 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 RASL11BQ9BPW5 248 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
SF3B1-207ENST00000468925 INSIG2Q9Y5U4 225 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 MPC1Q9Y5U8 109 aa3.92□□□□□ -1.78
SF3B1-207ENST00000468925 KIAA0100Q14667 2235 aaKnown RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 COL5A1P20908 1838 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1-27A0A075B6S5 117 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1-6A0A0C4DH72 117 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 A0A1B0GUT8 65 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 FAM240AA0A1B0GVK7 77 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 LINC01549A6NIU2 74 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 NCBP2LA6PVI3 153 aaKnown RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 USP17L23D6RBM5 183 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 PEX7O00628 323 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 SPINK4O60575 86 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ZG16O60844 167 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 BRI3O95415 125 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 APOHP02749 345 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ACYP1P07311 99 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 CDAP32320 146 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 CXCL12P48061 93 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 SUB1P53999 127 aaKnown RBP eCLIP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 UCNP55089 124 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 HHEXQ03014 270 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 EDDM3AQ14507 147 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 FXYD3Q14802 87 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ZNF77Q15935 545 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 CCL15Q16663 113 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 MEIG1Q5JSS6 88 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 SERTAD4-AS1Q5TG53 156 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 AMTNQ6UX39 209 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 CXCL17Q6UXB2 119 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ZNF493Q6ZR52 646 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 TMEM219Q86XT9 240 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 DRAM1Q8N682 238 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 KIR3DL3Q8N743 410 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms