RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 COX7CP15954 63 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 ROMO1P60602 79 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 KRTAP6-2Q3LI66 62 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 LPCAT3Q6P1A2 487 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 PATE2Q6UY27 113 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 TRAPPC6BQ86SZ2 158 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 SYCE1Q8N0S2 351 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 Q96NJ1 140 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 NIPSNAP1Q9BPW8 284 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 SIKE1Q9BRV8 207 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 BCL2L10Q9HD36 194 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 F5P12259 2224 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 PKHD1P08F94 4074 aa-1.54□□□□□ -2.66
SSB-208ENST00000468600 RAD50Q92878 1312 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 TRAV10A0A0B4J240 114 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 TNFP01375 233 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 MYL12AP19105 171 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 CASP1P29466 404 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 RPL12P30050 165 aaKnown RBP-1.55□□□□□ -2.66
SSB-208ENST00000468600 RPL37P61927 97 aaKnown RBP-1.55□□□□□ -2.66
SSB-208ENST00000468600 TSNQ15631 228 aaKnown RBP-1.55□□□□□ -2.66
SSB-208ENST00000468600 C1orf195Q5TG92 126 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 Q8TAT8 98 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 RMND5BQ96G75 393 aaPredicted RBP-1.55□□□□□ -2.66
SSB-208ENST00000468600 LPAR5Q9H1C0 372 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 HSPB8Q9UJY1 196 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 C2CD3Q4AC94 2353 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 PCNX1Q96RV3 2341 aa-1.55□□□□□ -2.66
SSB-208ENST00000468600 MED1Q15648 1581 aaPredicted RBP-1.55□□□□□ -2.66
SSB-208ENST00000468600 RBBP6Q7Z6E9 1792 aaKnown RBP-1.56□□□□□ -2.66
SSB-208ENST00000468600 EVPLLA8MZ36 301 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 CYB5BO43169 146 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 OR2J2O76002 312 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 GADD45GO95257 159 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 PMS2P3Q13401 168 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 GDPD1Q8N9F7 314 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 WFDC5Q8TCV5 224 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 C11orf68Q9H3H3 251 aaKnown RBP-1.56□□□□□ -2.66
SSB-208ENST00000468600 IDI2-AS1Q9NZ38 188 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 C3orf18Q9UK00 162 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 UTP11Q9Y3A2 253 aaKnown RBP-1.56□□□□□ -2.66
SSB-208ENST00000468600 BIRC6Q9NR09 4857 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 ECM29Q5VYK3 1845 aa-1.56□□□□□ -2.66
SSB-208ENST00000468600 NBPF19A0A087WUL8 3843 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 A0A087WSZ3 146 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 SSNA1O43805 119 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 TYMSP04818 313 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 NAA20P61599 178 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 OR52L1Q8NGH7 329 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 OR2T10Q8NGZ9 312 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 CANT1Q8WVQ1 401 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 CHMP5Q9NZZ3 219 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 PCTPQ9UKL6 214 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 LAMA2P24043 3122 aaKnown RBP-1.57□□□□□ -2.66
SSB-208ENST00000468600 FAT2Q9NYQ8 4349 aa-1.57□□□□□ -2.66
SSB-208ENST00000468600 RFX7Q2KHR2 1363 aa-1.58□□□□□ -2.66
SSB-208ENST00000468600 E7EUB6 86 aa-1.58□□□□□ -2.66
SSB-208ENST00000468600 S100A9P06702 114 aaKnown RBP-1.58□□□□□ -2.66
SSB-208ENST00000468600 RAB5BP61020 215 aa-1.58□□□□□ -2.66
SSB-208ENST00000468600 YPEL3P61236 119 aaPredicted RBP-1.58□□□□□ -2.66
SSB-208ENST00000468600 WFDC2Q14508 124 aa-1.58□□□□□ -2.66
SSB-208ENST00000468600 OCIAD2Q56VL3 154 aa-1.58□□□□□ -2.66
SSB-208ENST00000468600 CCDC94Q9BW85 323 aaPredicted RBP-1.58□□□□□ -2.66
SSB-208ENST00000468600 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.58□□□□□ -2.66
SSB-208ENST00000468600 MGAMO43451 1857 aa-1.58□□□□□ -2.66
SSB-208ENST00000468600 BCORL1Q5H9F3 1711 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 EXOC1LA0A1B0GW35 172 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 C8orf88P0DMB2 117 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 S100A4P26447 101 aaKnown RBP-1.59□□□□□ -2.66
SSB-208ENST00000468600 ANP32AP39687 249 aaKnown RBP-1.59□□□□□ -2.66
SSB-208ENST00000468600 DSCR4P56555 118 aaPredicted RBP-1.59□□□□□ -2.66
SSB-208ENST00000468600 CLVS2Q5SYC1 327 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 ALKAL1Q6UXT8 129 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 C4orf22Q6V702 233 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 Q8IZM0 81 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 NAT14Q8WUY8 206 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 ADAT3Q96EY9 351 aaPredicted RBP-1.59□□□□□ -2.66
SSB-208ENST00000468600 DCUN1D5Q9BTE7 237 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 CMTM6Q9NX76 183 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 RYR2Q92736 4967 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 USP9XQ93008 2570 aaPredicted RBP-1.59□□□□□ -2.66
SSB-208ENST00000468600 ABCC11Q96J66 1382 aa-1.59□□□□□ -2.66
SSB-208ENST00000468600 ESPL1Q14674 2120 aa-1.6□□□□□ -2.66
SSB-208ENST00000468600 PRORSD1PA6NEY8 169 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 B4DSR2 109 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 PIRO00625 290 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 EIF3IQ13347 325 aaKnown RBP-1.6□□□□□ -2.67
SSB-208ENST00000468600 PMAIP1Q13794 54 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 SFXN4Q6P4A7 337 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 ZNF431Q8TF32 576 aaPredicted RBP-1.6□□□□□ -2.67
SSB-208ENST00000468600 HIST1H2BLQ99880 126 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 PRTFDC1Q9NRG1 225 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 LAMC1P11047 1609 aa-1.6□□□□□ -2.67
SSB-208ENST00000468600 MYH10P35580 1976 aa-1.61□□□□□ -2.67
SSB-208ENST00000468600 NEO1Q92859 1461 aa-1.61□□□□□ -2.67
SSB-208ENST00000468600 PTPRFP10586 1907 aa-1.61□□□□□ -2.67
SSB-208ENST00000468600 M0R3E3 92 aa-1.61□□□□□ -2.67
SSB-208ENST00000468600 PFDN6O15212 129 aa-1.61□□□□□ -2.67
SSB-208ENST00000468600 ERC2-IT1O76042 136 aa-1.61□□□□□ -2.67
SSB-208ENST00000468600 HLA-DRB1P01911 266 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms